Analysis of interatomic Contacts of Structural Units in PDB entry:
6TH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TH2 entry

There are 4 chains in PDB entry 6TH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 184GLN 412
B
 HIS 184GLN 412
C
 HIS 184GLN 412
D
 HIS 184GLN 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6TH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
215 228Right-handed alpha
Helix 2
AA2
A
255 267Right-handed alpha
Helix 3
AA3
A
309 320Right-handed alpha
Helix 4
AA4
A
342 355Right-handed alpha
Helix 5
AA5
A
393 412Right-handed alpha
Helix 6
AA6
B
215 228Right-handed alpha
Helix 7
AA7
B
255 267Right-handed alpha
Helix 8
AA8
B
268 270Right-handed 310
Helix 9
AA9
B
309 320Right-handed alpha
Helix 10
AB1
B
342 355Right-handed alpha
Helix 11
AB2
B
393 412Right-handed alpha
Helix 12
AB3
C
215 228Right-handed alpha
Helix 13
AB4
C
255 267Right-handed alpha
Helix 14
AB5
C
268 270Right-handed 310
Helix 15
AB6
C
309 320Right-handed alpha
Helix 16
AB7
C
342 355Right-handed alpha
Helix 17
AB8
C
393 412Right-handed alpha
Helix 18
AB9
D
215 228Right-handed alpha
Helix 19
AC1
D
255 267Right-handed alpha
Helix 20
AC2
D
268 270Right-handed 310
Helix 21
AC3
D
309 320Right-handed alpha
Helix 22
AC4
D
342 355Right-handed alpha
Helix 23
AC5
D
364 368Right-handed 310
Helix 24
AC6
D
393 412Right-handed alpha
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There are 10 sheets in PDB entry 6TH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
231 236parallel
Strand 3
A
191 196parallel
Strand 4
A
272 275parallel
Strand 5
A
328 335parallel
Strand 6
A
358 363parallel
Strand 7
A
377 381anti-parallel
Strand 8
A
386 389anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
207 211anti-parallel
Strand 3
B
207 211anti-parallel
Strand 4
B
201 202anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 284first strand
Strand 2
A
304 306anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
231 236parallel
Strand 3
B
191 196parallel
Strand 4
B
272 275parallel
Strand 5
B
328 333parallel
Strand 6
B
358 361parallel
Strand 7
B
378 381anti-parallel
Strand 8
B
386 388anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
282 284first strand
Strand 2
B
304 306anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 252first strand
Strand 2
C
231 236parallel
Strand 3
C
191 196parallel
Strand 4
C
272 275parallel
Strand 5
C
328 334parallel
Strand 6
C
358 362parallel
Strand 7
C
377 381anti-parallel
Strand 8
C
386 389anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 202first strand
Strand 2
C
207 211anti-parallel
Strand 3
D
207 211anti-parallel
Strand 4
D
201 202anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
282 284first strand
Strand 2
C
304 306anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
249 252first strand
Strand 2
D
231 236parallel
Strand 3
D
191 196parallel
Strand 4
D
272 275parallel
Strand 5
D
328 333parallel
Strand 6
D
358 361parallel
Strand 7
D
378 381anti-parallel
Strand 8
D
386 388anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
282 284first strand
Strand 2
D
304 306anti-parallel
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