Analysis of interatomic Contacts of Structural Units in PDB entry:
6THL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6THL entry

There are 2 chains in PDB entry 6THL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 66VAL 298
B
 ILE 128HIS 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6THL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
147 151Right-handed 310
Helix 2
AA2
A
162 172Right-handed alpha
Helix 3
AA3
A
182 195Right-handed alpha
Helix 4
AA4
A
290 298Right-handed alpha
Helix 5
AA5
B
142 148Right-handed alpha
Helix 6
AA6
B
193 197Right-handed 310
Helix 7
AA7
B
198 209Right-handed alpha
Helix 8
AA8
B
226 236Right-handed alpha
Helix 9
AA9
B
263 267Right-handed 310
Helix 10
AB1
B
268 274Right-handed alpha
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There are 5 sheets in PDB entry 6THL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 117first strand
Strand 2
A
102 108anti-parallel
Strand 3
A
87 95anti-parallel
Strand 4
A
72 83anti-parallel
Strand 5
A
156 161anti-parallel
Strand 6
A
134 144anti-parallel
Strand 7
A
123 131anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
239 243anti-parallel
Strand 3
A
229 235anti-parallel
Strand 4
A
220 226anti-parallel
Strand 5
A
280 287anti-parallel
Strand 6
A
268 275anti-parallel
Strand 7
A
256 263anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 130first strand
Strand 2
B
133 136anti-parallel
Strand 3
B
277 279parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 153first strand
Strand 2
B
158 167anti-parallel
Strand 3
B
180 188anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 153first strand
Strand 2
B
158 167anti-parallel
Strand 3
B
283 287parallel
Strand 4
B
240 244anti-parallel
Strand 5
B
258 261anti-parallel
Strand 6
B
298 299parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il