Analysis of interatomic Contacts of Structural Units in PDB entry:
6THP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6THP entry

There are 2 chains in PDB entry 6THP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 54TRP 749
B
 GLY 54TRP 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 6THP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 72Right-handed alpha
Helix 2
AA2
A
81 94Right-handed alpha
Helix 3
AA3
A
105 122Right-handed alpha
Helix 4
AA4
A
129 144Right-handed alpha
Helix 5
AA5
A
144 150Right-handed alpha
Helix 6
AA6
A
153 160Right-handed alpha
Helix 7
AA7
A
161 164Right-handed 310
Helix 8
AA8
A
166 170Right-handed 310
Helix 9
AA9
A
172 178Right-handed alpha
Helix 10
AB1
A
179 181Right-handed 310
Helix 11
AB2
A
182 195Right-handed alpha
Helix 12
AB3
A
227 233Right-handed 310
Helix 13
AB4
A
234 236Right-handed 310
Helix 14
AB5
A
237 259Right-handed alpha
Helix 15
AB6
A
264 286Right-handed alpha
Helix 16
AB7
A
288 292Right-handed 310
Helix 17
AB8
A
294 299Right-handed alpha
Helix 18
AB9
A
304 311Right-handed alpha
Helix 19
AC1
A
321 332Right-handed alpha
Helix 20
AC2
A
347 359Right-handed alpha
Helix 21
AC3
A
362 379Right-handed alpha
Helix 22
AC4
A
380 382Right-handed 310
Helix 23
AC5
A
383 389Right-handed alpha
Helix 24
AC6
A
390 399Right-handed alpha
Helix 25
AC7
A
405 418Right-handed alpha
Helix 26
AC8
A
418 431Right-handed alpha
Helix 27
AC9
A
434 455Right-handed alpha
Helix 28
AD1
A
461 475Right-handed alpha
Helix 29
AD2
A
483 488Right-handed alpha
Helix 30
AD3
A
488 496Right-handed alpha
Helix 31
AD4
A
505 523Right-handed alpha
Helix 32
AD5
A
557 559Right-handed 310
Helix 33
AD6
A
569 576Right-handed alpha
Helix 34
AD7
A
576 588Right-handed alpha
Helix 35
AD8
A
592 596Right-handed 310
Helix 36
AD9
A
607 627Right-handed alpha
Helix 37
AE1
A
630 634Right-handed 310
Helix 38
AE2
A
643 669Right-handed alpha
Helix 39
AE3
A
680 692Right-handed alpha
Helix 40
AE4
A
698 709Right-handed alpha
Helix 41
AE5
A
713 724Right-handed alpha
Helix 42
AE6
A
725 733Right-handed alpha
Helix 43
AE7
B
58 72Right-handed alpha
Helix 44
AE8
B
81 94Right-handed alpha
Helix 45
AE9
B
105 122Right-handed alpha
Helix 46
AF1
B
129 144Right-handed alpha
Helix 47
AF2
B
144 151Right-handed alpha
Helix 48
AF3
B
153 158Right-handed alpha
Helix 49
AF4
B
159 164Right-handed 310
Helix 50
AF5
B
166 170Right-handed 310
Helix 51
AF6
B
172 178Right-handed alpha
Helix 52
AF7
B
182 195Right-handed alpha
Helix 53
AF8
B
227 233Right-handed 310
Helix 54
AF9
B
234 236Right-handed 310
Helix 55
AG1
B
237 260Right-handed alpha
Helix 56
AG2
B
264 286Right-handed alpha
Helix 57
AG3
B
288 293Right-handed 310
Helix 58
AG4
B
294 299Right-handed alpha
Helix 59
AG5
B
304 311Right-handed alpha
Helix 60
AG6
B
321 331Right-handed alpha
Helix 61
AG7
B
332 334Right-handed 310
Helix 62
AG8
B
347 360Right-handed alpha
Helix 63
AG9
B
362 379Right-handed alpha
Helix 64
AH1
B
380 382Right-handed 310
Helix 65
AH2
B
383 389Right-handed alpha
Helix 66
AH3
B
390 399Right-handed alpha
Helix 67
AH4
B
405 418Right-handed alpha
Helix 68
AH5
B
418 431Right-handed alpha
Helix 69
AH6
B
433 454Right-handed alpha
Helix 70
AH7
B
461 473Right-handed alpha
Helix 71
AH8
B
483 488Right-handed alpha
Helix 72
AH9
B
488 496Right-handed alpha
Helix 73
AI1
B
505 522Right-handed alpha
Helix 74
AI2
B
523 525Right-handed 310
Helix 75
AI3
B
547 549Right-handed 310
Helix 76
AI4
B
557 559Right-handed 310
Helix 77
AI5
B
569 588Right-handed alpha
Helix 78
AI6
B
592 596Right-handed 310
Helix 79
AI7
B
607 627Right-handed alpha
Helix 80
AI8
B
630 634Right-handed 310
Helix 81
AI9
B
643 669Right-handed alpha
Helix 82
AJ1
B
680 692Right-handed alpha
Helix 83
AJ2
B
698 709Right-handed alpha
Helix 84
AJ3
B
713 724Right-handed alpha
Helix 85
AJ4
B
725 733Right-handed alpha
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There are 6 sheets in PDB entry 6THP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
695 697anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 207first strand
Strand 2
A
210 219anti-parallel
Strand 3
A
342 345parallel
Strand 4
A
301 303anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 480first strand
Strand 2
A
551 555parallel
Strand 3
A
544 546anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
695 697anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 206first strand
Strand 2
B
214 219anti-parallel
Strand 3
B
342 345parallel
Strand 4
B
301 303anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
476 480first strand
Strand 2
B
551 555parallel
Strand 3
B
544 546anti-parallel
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