Analysis of interatomic Contacts of Structural Units in PDB entry:
6TIQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TIQ entry

There is 1 chain in PDB entry 6TIQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 6TIQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed alpha
Helix 2
AA2
A
11 19Right-handed alpha
Helix 3
AA3
A
267 272Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6TIQ.

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 34first strand
Strand 2
A
40 48anti-parallel
Strand 3
A
53 64anti-parallel
Strand 4
A
69 76anti-parallel
Strand 5
A
81 88anti-parallel
Strand 6
A
95 102anti-parallel
Strand 7
A
111 119anti-parallel
Strand 8
A
124 130anti-parallel
Strand 9
A
137 146anti-parallel
Strand 10
A
149 158anti-parallel
Strand 11
A
163 174anti-parallel
Strand 12
A
178 185anti-parallel
Strand 13
A
189 198anti-parallel
Strand 14
A
202 211anti-parallel
Strand 15
A
216 228anti-parallel
Strand 16
A
231 238anti-parallel
Strand 17
A
242 250anti-parallel
Strand 18
A
255 264anti-parallel
Strand 19
A
273 283anti-parallel
Strand 20
A
24 34parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il