Analysis of interatomic Contacts of Structural Units in PDB entry:
6TIW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TIW entry

There are 3 chains in PDB entry 6TIW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	LYS 15	LEU 369
B	MET 1	THR 429
A	MET 1	ASP 438

There are 43 helices in PDB entry 6TIW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	29	36	Right-handed alpha
Helix 2	AA2	K	77	96	Right-handed alpha
Helix 3	AA3	K	110	117	Right-handed alpha
Helix 4	AA4	K	135	151	Right-handed alpha
Helix 5	AA5	K	206	222	Right-handed alpha
Helix 6	AA6	K	271	276	Right-handed alpha
Helix 7	AA7	K	278	305	Right-handed alpha
Helix 8	AA8	K	310	313	Right-handed 310
Helix 9	AA9	K	314	320	Right-handed alpha
Helix 10	AB1	K	321	324	Right-handed 310
Helix 11	AB2	K	342	359	Right-handed alpha
Helix 12	AB3	B	9	29	Right-handed alpha
Helix 13	AB4	B	40	51	Right-handed alpha
Helix 14	AB5	B	69	79	Right-handed alpha
Helix 15	AB6	B	100	127	Right-handed alpha
Helix 16	AB7	B	141	159	Right-handed alpha
Helix 17	AB8	B	179	196	Right-handed alpha
Helix 18	AB9	B	204	216	Right-handed alpha
Helix 19	AC1	B	221	242	Right-handed alpha
Helix 20	AC2	B	249	258	Right-handed alpha
Helix 21	AC3	B	275	282	Right-handed alpha
Helix 22	AC4	B	285	295	Right-handed alpha
Helix 23	AC5	B	296	299	Right-handed 310
Helix 24	AC6	B	322	337	Right-handed alpha
Helix 25	AC7	B	371	392	Right-handed alpha
Helix 26	AC8	B	394	402	Right-handed alpha
Helix 27	AC9	B	404	428	Right-handed alpha
Helix 28	AD1	A	9	29	Right-handed alpha
Helix 29	AD2	A	46	52	Right-handed alpha
Helix 30	AD3	A	71	81	Right-handed alpha
Helix 31	AD4	A	81	87	Right-handed alpha
Helix 32	AD5	A	102	129	Right-handed alpha
Helix 33	AD6	A	143	162	Right-handed alpha
Helix 34	AD7	A	181	198	Right-handed alpha
Helix 35	AD8	A	205	218	Right-handed alpha
Helix 36	AD9	A	223	244	Right-handed alpha
Helix 37	AE1	A	251	260	Right-handed alpha
Helix 38	AE2	A	277	284	Right-handed alpha
Helix 39	AE3	A	287	297	Right-handed alpha
Helix 40	AE4	A	324	338	Right-handed alpha
Helix 41	AE5	A	381	402	Right-handed alpha
Helix 42	AE6	A	404	411	Right-handed alpha
Helix 43	AE7	A	414	437	Right-handed alpha

There are 11 sheets in PDB entry 6TIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	70	72	first strand
Strand 2	K	20	25	parallel
Strand 3	K	329	336	parallel
Strand 4	K	98	105	parallel
Strand 5	K	255	265	parallel
Strand 6	K	236	247	anti-parallel
Strand 7	K	153	164	anti-parallel
Strand 8	K	167	170	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	70	72	first strand
Strand 2	K	20	25	parallel
Strand 3	K	329	336	parallel
Strand 4	K	98	105	parallel
Strand 5	K	255	265	parallel
Strand 6	K	236	247	anti-parallel
Strand 7	K	153	164	anti-parallel
Strand 8	K	202	204	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	44	first strand
Strand 2	K	49	53	anti-parallel
Strand 3	K	63	67	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	183	187	first strand
Strand 2	K	190	197	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	5	8	parallel
Strand 3	B	133	138	parallel
Strand 4	B	165	170	parallel
Strand 5	B	198	203	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	58	60	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	270	first strand
Strand 2	B	366	369	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	317	first strand
Strand 2	B	350	353	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	6	8	parallel
Strand 3	A	134	138	parallel
Strand 4	A	165	169	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	60	63	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	273	first strand
Strand 2	A	375	379	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TIW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TIW