Analysis of interatomic Contacts of Structural Units in PDB entry:
6TJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TJ2 entry

There are 3 chains in PDB entry 6TJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 11ASP 253
B
 THR 11ASP 253
C
 PRO 12ASP 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6TJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 27Right-handed 310
Helix 2
AA2
A
28 38Right-handed alpha
Helix 3
AA3
A
59 74Right-handed alpha
Helix 4
AA4
A
86 98Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
124 139Right-handed alpha
Helix 7
AA7
A
146 154Right-handed alpha
Helix 8
AA8
A
159 169Right-handed alpha
Helix 9
AA9
A
175 180Right-handed alpha
Helix 10
AB1
A
184 190Right-handed alpha
Helix 11
AB2
A
214 219Right-handed alpha
Helix 12
AB3
A
234 239Right-handed alpha
Helix 13
AB4
A
239 252Right-handed alpha
Helix 14
AB5
B
24 27Right-handed 310
Helix 15
AB6
B
28 38Right-handed alpha
Helix 16
AB7
B
59 75Right-handed alpha
Helix 17
AB8
B
86 98Right-handed alpha
Helix 18
AB9
B
119 123Right-handed 310
Helix 19
AC1
B
124 139Right-handed alpha
Helix 20
AC2
B
146 154Right-handed alpha
Helix 21
AC3
B
159 168Right-handed alpha
Helix 22
AC4
B
175 180Right-handed alpha
Helix 23
AC5
B
184 190Right-handed alpha
Helix 24
AC6
B
214 219Right-handed alpha
Helix 25
AC7
B
234 239Right-handed alpha
Helix 26
AC8
B
239 252Right-handed alpha
Helix 27
AC9
C
24 27Right-handed 310
Helix 28
AD1
C
28 38Right-handed alpha
Helix 29
AD2
C
59 74Right-handed alpha
Helix 30
AD3
C
86 98Right-handed alpha
Helix 31
AD4
C
119 123Right-handed 310
Helix 32
AD5
C
124 139Right-handed alpha
Helix 33
AD6
C
146 154Right-handed alpha
Helix 34
AD7
C
159 169Right-handed alpha
Helix 35
AD8
C
175 180Right-handed alpha
Helix 36
AD9
C
184 190Right-handed alpha
Helix 37
AE1
C
214 219Right-handed alpha
Helix 38
AE2
C
234 239Right-handed alpha
Helix 39
AE3
C
239 252Right-handed alpha
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There are 6 sheets in PDB entry 6TJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
14 18parallel
Strand 3
A
79 85parallel
Strand 4
A
102 110parallel
Strand 5
A
194 199parallel
Strand 6
A
224 228parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
173 174anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 43first strand
Strand 2
B
14 18parallel
Strand 3
B
79 85parallel
Strand 4
B
102 110parallel
Strand 5
B
194 199parallel
Strand 6
B
224 228parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
173 174anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 43first strand
Strand 2
C
14 18parallel
Strand 3
C
79 85parallel
Strand 4
C
102 110parallel
Strand 5
C
194 199parallel
Strand 6
C
224 228parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 143first strand
Strand 2
C
173 174anti-parallel
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