Analysis of interatomic Contacts of Structural Units in PDB entry:
6TJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TJL entry

There are 2 chains in PDB entry 6TJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 25GLN 241
B
 GLN 25GLN 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6TJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 47Right-handed alpha
Helix 2
AA2
A
53 60Right-handed alpha
Helix 3
AA3
A
69 83Right-handed alpha
Helix 4
AA4
A
102 105Right-handed 310
Helix 5
AA5
A
106 113Right-handed alpha
Helix 6
AA6
A
114 122Right-handed alpha
Helix 7
AA7
A
124 134Right-handed alpha
Helix 8
AA8
A
145 147Right-handed 310
Helix 9
AA9
A
148 160Right-handed alpha
Helix 10
AB1
A
174 177Right-handed 310
Helix 11
AB2
A
214 222Right-handed alpha
Helix 12
AB3
B
38 48Right-handed alpha
Helix 13
AB4
B
53 60Right-handed alpha
Helix 14
AB5
B
69 83Right-handed alpha
Helix 15
AB6
B
102 105Right-handed 310
Helix 16
AB7
B
106 113Right-handed alpha
Helix 17
AB8
B
114 122Right-handed alpha
Helix 18
AB9
B
124 134Right-handed alpha
Helix 19
AC1
B
145 147Right-handed 310
Helix 20
AC2
B
148 161Right-handed alpha
Helix 21
AC3
B
174 177Right-handed 310
Helix 22
AC4
B
214 222Right-handed alpha
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There are 5 sheets in PDB entry 6TJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
210 213anti-parallel
Strand 3
A
196 199anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 143first strand
Strand 2
A
233 238anti-parallel
Strand 3
A
165 172anti-parallel
Strand 4
A
182 187anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
230 231anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
210 213anti-parallel
Strand 3
B
196 199anti-parallel
Strand 4
B
182 191anti-parallel
Strand 5
B
165 172anti-parallel
Strand 6
B
233 238anti-parallel
Strand 7
B
138 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
230 231anti-parallel
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