Analysis of interatomic Contacts of Structural Units in PDB entry:
6TJV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TJV entry

There are 18 chains in PDB entry 6TJV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 5	PHE 370
B	GLY 13	GLN 494
C	VAL 13	LYS 126
D	MET 10	ALA 488
E	MET 1	LYS 100
F	PHE 5	ALA 604
G	MET 1	GLU 168
H	PRO 2	ARG 394
I	LYS 2	SER 194
J	GLY 13	TYR 168
K	PRO 7	PRO 212
L	MET 1	SER 76
M	MET 1	HIS 110
N	GLY 2	ALA 148
O	ALA 2	ALA 69
P	LYS 12	LEU 437
Q	ALA 2	VAL 149
S	ILE 45	VAL 99

There are186 helices in PDB entry 6TJV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	18	Right-handed alpha
Helix 2	AA2	A	21	28	Right-handed alpha
Helix 3	AA3	A	30	60	Right-handed alpha
Helix 4	AA4	A	74	86	Right-handed alpha
Helix 5	AA5	A	101	106	Right-handed alpha
Helix 6	AA6	A	107	113	Right-handed alpha
Helix 7	AA7	A	114	117	Right-handed 310
Helix 8	AA8	A	130	139	Right-handed alpha
Helix 9	AA9	A	141	152	Right-handed alpha
Helix 10	AB1	A	155	167	Right-handed alpha
Helix 11	AB2	A	173	188	Right-handed alpha
Helix 12	AB3	A	191	197	Right-handed alpha
Helix 13	AB4	A	207	211	Right-handed 310
Helix 14	AB5	A	214	225	Right-handed alpha
Helix 15	AB6	A	233	237	Right-handed 310
Helix 16	AB7	A	243	249	Right-handed 310
Helix 17	AB8	A	251	261	Right-handed alpha
Helix 18	AB9	A	262	277	Right-handed alpha
Helix 19	AC1	A	295	299	Right-handed 310
Helix 20	AC2	A	302	329	Right-handed alpha
Helix 21	AC3	A	347	366	Right-handed alpha
Helix 22	AC4	B	15	19	Right-handed 310
Helix 23	AC5	B	20	38	Right-handed alpha
Helix 24	AC6	B	47	57	Right-handed alpha
Helix 25	AC7	B	58	62	Right-handed 310
Helix 26	AC8	B	77	98	Right-handed alpha
Helix 27	AC9	B	98	105	Right-handed alpha
Helix 28	AD1	B	109	129	Right-handed alpha
Helix 29	AD2	B	131	151	Right-handed alpha
Helix 30	AD3	B	156	188	Right-handed alpha
Helix 31	AD4	B	194	199	Right-handed alpha
Helix 32	AD5	B	205	224	Right-handed alpha
Helix 33	AD6	B	231	237	Right-handed alpha
Helix 34	AD7	B	240	264	Right-handed alpha
Helix 35	AD8	B	273	292	Right-handed alpha
Helix 36	AD9	B	293	295	Right-handed 310
Helix 37	AE1	B	298	315	Right-handed alpha
Helix 38	AE2	B	324	354	Right-handed alpha
Helix 39	AE3	B	358	363	Right-handed 310
Helix 40	AE4	B	364	369	Right-handed alpha
Helix 41	AE5	B	369	385	Right-handed alpha
Helix 42	AE6	B	389	404	Right-handed alpha
Helix 43	AE7	B	407	435	Right-handed alpha
Helix 44	AE8	B	458	474	Right-handed alpha
Helix 45	AE9	B	479	490	Right-handed alpha
Helix 46	AF1	C	20	31	Right-handed alpha
Helix 47	AF2	C	32	43	Right-handed alpha
Helix 48	AF3	C	72	97	Right-handed alpha
Helix 49	AF4	C	97	102	Right-handed alpha
Helix 50	AF5	C	104	126	Right-handed alpha
Helix 51	AF6	D	11	25	Right-handed alpha
Helix 52	AF7	D	29	54	Right-handed alpha
Helix 53	AF8	D	71	75	Right-handed 310
Helix 54	AF9	D	86	103	Right-handed alpha
Helix 55	AG1	D	110	128	Right-handed alpha
Helix 56	AG2	D	131	153	Right-handed alpha
Helix 57	AG3	D	157	186	Right-handed alpha
Helix 58	AG4	D	206	219	Right-handed alpha
Helix 59	AG5	D	230	237	Right-handed alpha
Helix 60	AG6	D	239	265	Right-handed alpha
Helix 61	AG7	D	266	295	Right-handed alpha
Helix 62	AG8	D	297	318	Right-handed alpha
Helix 63	AG9	D	322	354	Right-handed alpha
Helix 64	AH1	D	371	386	Right-handed alpha
Helix 65	AH2	D	391	405	Right-handed alpha
Helix 66	AH3	D	409	434	Right-handed alpha
Helix 67	AH4	D	449	452	Right-handed 310
Helix 68	AH5	D	453	469	Right-handed alpha
Helix 69	AH6	D	470	475	Right-handed alpha
Helix 70	AH7	D	477	487	Right-handed alpha
Helix 71	AH8	E	2	24	Right-handed alpha
Helix 72	AH9	E	26	52	Right-handed alpha
Helix 73	AI1	E	58	89	Right-handed alpha
Helix 74	AI2	E	92	96	Right-handed 310
Helix 75	AI3	F	8	10	Right-handed 310
Helix 76	AI4	F	11	23	Right-handed alpha
Helix 77	AI5	F	24	27	Right-handed 310
Helix 78	AI6	F	37	61	Right-handed alpha
Helix 79	AI7	F	88	113	Right-handed alpha
Helix 80	AI8	F	119	139	Right-handed alpha
Helix 81	AI9	F	143	161	Right-handed alpha
Helix 82	AJ1	F	168	193	Right-handed alpha
Helix 83	AJ2	F	194	199	Right-handed alpha
Helix 84	AJ3	F	204	212	Right-handed alpha
Helix 85	AJ4	F	216	235	Right-handed alpha
Helix 86	AJ5	F	241	247	Right-handed alpha
Helix 87	AJ6	F	253	261	Right-handed alpha
Helix 88	AJ7	F	266	273	Right-handed alpha
Helix 89	AJ8	F	273	278	Right-handed alpha
Helix 90	AJ9	F	282	304	Right-handed alpha
Helix 91	AK1	F	312	329	Right-handed alpha
Helix 92	AK2	F	331	360	Right-handed alpha
Helix 93	AK3	F	364	368	Right-handed 310
Helix 94	AK4	F	376	388	Right-handed alpha
Helix 95	AK5	F	399	411	Right-handed alpha
Helix 96	AK6	F	412	438	Right-handed alpha
Helix 97	AK7	F	443	447	Right-handed 310
Helix 98	AK8	F	453	477	Right-handed alpha
Helix 99	AK9	F	486	509	Right-handed alpha
Helix 100	AL1	F	521	529	Right-handed alpha
Helix 101	AL2	F	530	532	Right-handed 310
Helix 102	AL3	F	533	542	Right-handed alpha
Helix 103	AL4	F	542	578	Right-handed alpha
Helix 104	AL5	F	579	583	Right-handed 310
Helix 105	AL6	F	586	598	Right-handed alpha
Helix 106	AL7	G	2	29	Right-handed alpha
Helix 107	AL8	G	31	52	Right-handed alpha
Helix 108	AL9	G	55	66	Right-handed alpha
Helix 109	AM1	G	69	81	Right-handed alpha
Helix 110	AM2	G	93	118	Right-handed alpha
Helix 111	AM3	G	130	141	Right-handed alpha
Helix 112	AM4	G	143	165	Right-handed alpha
Helix 113	AM5	H	50	56	Right-handed alpha
Helix 114	AM6	H	59	68	Right-handed alpha
Helix 115	AM7	H	76	91	Right-handed alpha
Helix 116	AM8	H	95	125	Right-handed alpha
Helix 117	AM9	H	129	138	Right-handed alpha
Helix 118	AN1	H	138	149	Right-handed alpha
Helix 119	AN2	H	172	194	Right-handed alpha
Helix 120	AN3	H	197	204	Right-handed alpha
Helix 121	AN4	H	211	218	Right-handed alpha
Helix 122	AN5	H	222	227	Right-handed alpha
Helix 123	AN6	H	257	281	Right-handed alpha
Helix 124	AN7	H	287	298	Right-handed alpha
Helix 125	AN8	H	302	310	Right-handed 310
Helix 126	AN9	H	357	363	Right-handed alpha
Helix 127	AO1	H	367	371	Right-handed 310
Helix 128	AO2	H	377	385	Right-handed alpha
Helix 129	AO3	H	388	392	Right-handed 310
Helix 130	AO4	I	3	32	Right-handed alpha
Helix 131	AO5	I	40	44	Right-handed 310
Helix 132	AO6	I	67	72	Right-handed alpha
Helix 133	AO7	I	107	113	Right-handed alpha
Helix 134	AO8	I	130	133	Right-handed 310
Helix 135	AO9	I	147	151	Right-handed 310
Helix 136	AP1	I	159	163	Right-handed 310
Helix 137	AP2	I	183	193	Right-handed alpha
Helix 138	AP3	J	45	56	Right-handed alpha
Helix 139	AP4	J	119	129	Right-handed alpha
Helix 140	AP5	J	161	165	Right-handed 310
Helix 141	AP6	K	25	41	Right-handed alpha
Helix 142	AP7	K	51	62	Right-handed alpha
Helix 143	AP8	K	94	104	Right-handed alpha
Helix 144	AP9	K	116	119	Right-handed 310
Helix 145	AQ1	K	121	125	Right-handed 310
Helix 146	AQ2	K	134	138	Right-handed 310
Helix 147	AQ3	K	151	167	Right-handed alpha
Helix 148	AQ4	K	168	169	Right-handed 310
Helix 149	AQ5	K	170	174	Right-handed 310
Helix 150	AQ6	K	204	208	Right-handed 310
Helix 151	AQ7	L	4	22	Right-handed alpha
Helix 152	AQ8	L	23	35	Right-handed alpha
Helix 153	AQ9	L	40	61	Right-handed alpha
Helix 154	AR1	L	62	65	Right-handed 310
Helix 155	AR2	M	42	58	Right-handed alpha
Helix 156	AR3	M	66	88	Right-handed alpha
Helix 157	AR4	N	7	17	Right-handed alpha
Helix 158	AR5	N	30	40	Right-handed alpha
Helix 159	AR6	N	84	90	Right-handed alpha
Helix 160	AR7	N	104	108	Right-handed 310
Helix 161	AR8	N	109	122	Right-handed alpha
Helix 162	AR9	O	30	34	Right-handed 310
Helix 163	AS1	O	64	66	Right-handed 310
Helix 164	AS2	P	20	29	Right-handed alpha
Helix 165	AS3	P	37	68	Right-handed alpha
Helix 166	AS4	P	82	86	Right-handed 310
Helix 167	AS5	P	109	119	Right-handed alpha
Helix 168	AS6	P	125	132	Right-handed alpha
Helix 169	AS7	P	138	149	Right-handed alpha
Helix 170	AS8	P	156	161	Right-handed alpha
Helix 171	AS9	P	165	178	Right-handed alpha
Helix 172	AT1	P	181	191	Right-handed alpha
Helix 173	AT2	P	195	229	Right-handed alpha
Helix 174	AT3	P	233	248	Right-handed alpha
Helix 175	AT4	P	268	272	Right-handed 310
Helix 176	AT5	P	274	279	Right-handed alpha
Helix 177	AT6	P	280	288	Right-handed alpha
Helix 178	AT7	P	333	340	Right-handed alpha
Helix 179	AT8	P	345	354	Right-handed alpha
Helix 180	AT9	P	361	390	Right-handed alpha
Helix 181	AU1	P	398	414	Right-handed alpha
Helix 182	AU2	Q	3	11	Right-handed alpha
Helix 183	AU3	Q	16	24	Right-handed alpha
Helix 184	AU4	Q	50	59	Right-handed alpha
Helix 185	AU5	Q	60	72	Right-handed alpha
Helix 186	AU6	Q	78	86	Right-handed alpha

There are 19 sheets in PDB entry 6TJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	68	first strand
Strand 2	D	78	82	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	74	first strand
Strand 2	F	81	85	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	14	first strand
Strand 2	H	29	32	anti-parallel
Strand 3	H	39	41	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	159	160	first strand
Strand 2	H	163	164	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	327	332	first strand
Strand 2	H	337	342	anti-parallel
Strand 3	H	354	356	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	58	first strand
Strand 2	I	118	120	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	79	82	first strand
Strand 2	I	93	99	anti-parallel
Strand 3	I	135	136	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	30	31	first strand
Strand 2	J	37	40	anti-parallel
Strand 3	J	95	97	parallel
Strand 4	J	79	80	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	68	first strand
Strand 2	J	75	77	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	107	108	first strand
Strand 2	J	132	133	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	83	87	first strand
Strand 2	K	110	114	parallel
Strand 3	K	143	145	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	182	184	first strand
Strand 2	M	31	33	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	5	7	first strand
Strand 2	M	10	12	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	39	40	first strand
Strand 2	M	91	92	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	18	19	first strand
Strand 2	N	127	130	parallel
Strand 3	N	97	102	parallel
Strand 4	N	42	46	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	40	44	first strand
Strand 2	O	47	50	anti-parallel
Strand 3	O	59	62	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	257	259	first strand
Strand 2	P	262	264	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	38	40	first strand
Strand 2	Q	123	125	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	86	90	first strand
Strand 2	S	74	79	anti-parallel
Strand 3	S	64	71	anti-parallel
Strand 4	S	50	53	anti-parallel
Strand 5	S	95	96	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TJV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TJV