Analysis of interatomic Contacts of Structural Units in PDB entry:
6TK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TK9 entry

There are 6 chains in PDB entry 6TK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2LEU 272
B
 GLU 2LEU 272
C
 GLU 2LEU 272
D
 GLU 2LEU 272
E
 GLU 2LEU 272
F
 GLU 2LEU 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6TK9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed alpha
Helix 2
AA2
A
32 39Right-handed 310
Helix 3
AA3
A
48 50Right-handed 310
Helix 4
AA4
A
83 87Right-handed 310
Helix 5
AA5
A
89 94Right-handed alpha
Helix 6
AA6
A
94 104Right-handed alpha
Helix 7
AA7
A
161 175Right-handed alpha
Helix 8
AA8
A
194 204Right-handed alpha
Helix 9
AA9
A
213 224Right-handed alpha
Helix 10
AB1
A
246 257Right-handed alpha
Helix 11
AB2
A
257 272Right-handed alpha
Helix 12
AB3
B
4 16Right-handed alpha
Helix 13
AB4
B
32 37Right-handed 310
Helix 14
AB5
B
48 50Right-handed 310
Helix 15
AB6
B
83 87Right-handed 310
Helix 16
AB7
B
89 94Right-handed alpha
Helix 17
AB8
B
94 103Right-handed alpha
Helix 18
AB9
B
161 176Right-handed alpha
Helix 19
AC1
B
194 204Right-handed alpha
Helix 20
AC2
B
213 223Right-handed alpha
Helix 21
AC3
B
246 257Right-handed alpha
Helix 22
AC4
B
257 272Right-handed alpha
Helix 23
AC5
C
4 16Right-handed alpha
Helix 24
AC6
C
32 39Right-handed 310
Helix 25
AC7
C
48 50Right-handed 310
Helix 26
AC8
C
83 87Right-handed 310
Helix 27
AC9
C
89 94Right-handed alpha
Helix 28
AD1
C
94 104Right-handed alpha
Helix 29
AD2
C
161 176Right-handed alpha
Helix 30
AD3
C
194 204Right-handed alpha
Helix 31
AD4
C
213 223Right-handed alpha
Helix 32
AD5
C
246 257Right-handed alpha
Helix 33
AD6
C
257 272Right-handed alpha
Helix 34
AD7
D
4 16Right-handed alpha
Helix 35
AD8
D
32 39Right-handed 310
Helix 36
AD9
D
48 50Right-handed 310
Helix 37
AE1
D
83 87Right-handed 310
Helix 38
AE2
D
89 94Right-handed alpha
Helix 39
AE3
D
94 103Right-handed alpha
Helix 40
AE4
D
161 175Right-handed alpha
Helix 41
AE5
D
194 204Right-handed alpha
Helix 42
AE6
D
213 224Right-handed alpha
Helix 43
AE7
D
246 257Right-handed alpha
Helix 44
AE8
D
257 271Right-handed alpha
Helix 45
AE9
E
4 16Right-handed alpha
Helix 46
AF1
E
32 39Right-handed 310
Helix 47
AF2
E
48 50Right-handed 310
Helix 48
AF3
E
83 87Right-handed 310
Helix 49
AF4
E
89 94Right-handed alpha
Helix 50
AF5
E
94 103Right-handed alpha
Helix 51
AF6
E
161 175Right-handed alpha
Helix 52
AF7
E
194 204Right-handed alpha
Helix 53
AF8
E
213 224Right-handed alpha
Helix 54
AF9
E
246 272Right-handed alpha
Helix 55
AG1
F
4 16Right-handed alpha
Helix 56
AG2
F
32 37Right-handed 310
Helix 57
AG3
F
48 50Right-handed 310
Helix 58
AG4
F
83 87Right-handed 310
Helix 59
AG5
F
89 103Right-handed alpha
Helix 60
AG6
F
161 175Right-handed alpha
Helix 61
AG7
F
194 204Right-handed alpha
Helix 62
AG8
F
213 224Right-handed alpha
Helix 63
AG9
F
246 257Right-handed alpha
Helix 64
AH1
F
257 272Right-handed alpha
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There are 6 sheets in PDB entry 6TK9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
64 70anti-parallel
Strand 3
A
73 79anti-parallel
Strand 4
A
24 28parallel
Strand 5
A
107 116parallel
Strand 6
A
226 236parallel
Strand 7
A
125 134anti-parallel
Strand 8
A
180 186parallel
Strand 9
A
208 210parallel
Strand 10
A
107 116anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 46first strand
Strand 2
B
64 70anti-parallel
Strand 3
B
73 79anti-parallel
Strand 4
B
24 28parallel
Strand 5
B
107 116parallel
Strand 6
B
226 236parallel
Strand 7
B
125 134anti-parallel
Strand 8
B
180 186parallel
Strand 9
B
208 210parallel
Strand 10
B
107 116anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 46first strand
Strand 2
C
64 70anti-parallel
Strand 3
C
73 79anti-parallel
Strand 4
C
24 28parallel
Strand 5
C
107 116parallel
Strand 6
C
226 236parallel
Strand 7
C
126 134anti-parallel
Strand 8
C
180 186parallel
Strand 9
C
208 210parallel
Strand 10
C
107 116anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 46first strand
Strand 2
D
64 70anti-parallel
Strand 3
D
73 79anti-parallel
Strand 4
D
24 28parallel
Strand 5
D
107 116parallel
Strand 6
D
226 236parallel
Strand 7
D
125 134anti-parallel
Strand 8
D
180 186parallel
Strand 9
D
208 210parallel
Strand 10
D
107 116anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 46first strand
Strand 2
E
64 70anti-parallel
Strand 3
E
73 79anti-parallel
Strand 4
E
24 28parallel
Strand 5
E
107 116parallel
Strand 6
E
226 236parallel
Strand 7
E
125 134anti-parallel
Strand 8
E
180 186parallel
Strand 9
E
208 210parallel
Strand 10
E
107 116anti-parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 46first strand
Strand 2
F
64 70anti-parallel
Strand 3
F
73 79anti-parallel
Strand 4
F
24 28parallel
Strand 5
F
107 116parallel
Strand 6
F
226 236parallel
Strand 7
F
125 134anti-parallel
Strand 8
F
180 186parallel
Strand 9
F
208 210parallel
Strand 10
F
107 116anti-parallel
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