Analysis of interatomic Contacts of Structural Units in PDB entry:
6TKU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TKU entry

There is 1 chain in PDB entry 6TKU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 34GLY 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6TKU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 51Right-handed alpha
Helix 2
AA2
A
371 373Right-handed 310
Helix 3
AA3
A
407 411Right-handed 310
Helix 4
AA4
A
513 518Right-handed alpha
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There are 11 sheets in PDB entry 6TKU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
96 99parallel
Strand 3
A
127 129parallel
Strand 4
A
154 158parallel
Strand 5
A
177 181parallel
Strand 6
A
211 213parallel
Strand 7
A
237 239parallel
Strand 8
A
269 271parallel
Strand 9
A
300 302parallel
Strand 10
A
321 323parallel
Strand 11
A
348 350parallel
Strand 12
A
356 358anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 75first strand
Strand 2
A
107 110parallel
Strand 3
A
138 146parallel
Strand 4
A
161 169parallel
Strand 5
A
187 191parallel
Strand 6
A
220 222parallel
Strand 7
A
252 257parallel
Strand 8
A
280 286parallel
Strand 9
A
308 310parallel
Strand 10
A
335 336parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
122 124parallel
Strand 3
A
149 151parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 208first strand
Strand 2
A
229 234parallel
Strand 3
A
263 266parallel
Strand 4
A
292 297parallel
Strand 5
A
314 318parallel
Strand 6
A
342 344parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 369first strand
Strand 2
A
477 487anti-parallel
Strand 3
A
391 395anti-parallel
Strand 4
A
381 383anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 369first strand
Strand 2
A
477 487anti-parallel
Strand 3
A
416 425anti-parallel
Strand 4
A
452 458anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 405first strand
Strand 2
A
466 471anti-parallel
Strand 3
A
431 436anti-parallel
Strand 4
A
439 445anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 495first strand
Strand 2
A
568 574anti-parallel
Strand 3
A
524 525anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 495first strand
Strand 2
A
568 574anti-parallel
Strand 3
A
529 530anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
562 563anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 508first strand
Strand 2
A
550 556anti-parallel
Strand 3
A
537 543anti-parallel
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