Analysis of interatomic Contacts of Structural Units in PDB entry:
6TKY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TKY entry

There are 4 chains in PDB entry 6TKY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 1694THR 2150
C
 GLN 2GLU 178
D
 MET 1GLU 178
A
 THR 1695GLY 2151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6TKY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
1696 1713Right-handed alpha
Helix 2
2
B
1716 1736Right-handed alpha
Helix 3
3
B
1777 1780Right-handed 310
Helix 4
4
B
1785 1791Right-handed 310
Helix 5
5
B
1806 1822Right-handed alpha
Helix 6
6
B
1826 1843Right-handed 310
Helix 7
7
B
1846 1864Right-handed alpha
Helix 8
8
B
1906 1921Right-handed alpha
Helix 9
9
B
1923 1925Right-handed 310
Helix 10
10
B
1937 1939Right-handed 310
Helix 11
11
B
1958 1961Right-handed 310
Helix 12
12
B
1969 1971Right-handed 310
Helix 13
13
B
2028 2048Right-handed alpha
Helix 14
14
B
2054 2065Right-handed alpha
Helix 15
15
B
2073 2080Right-handed 310
Helix 16
16
B
2083 2088Right-handed alpha
Helix 17
17
B
2091 2116Right-handed alpha
Helix 18
18
B
2121 2145Right-handed 310
Helix 19
19
C
12 14Right-handed 310
Helix 20
20
C
16 25Right-handed alpha
Helix 21
21
C
29 31Right-handed 310
Helix 22
22
C
62 71Right-handed 310
Helix 23
23
C
87 95Right-handed alpha
Helix 24
24
C
97 104Right-handed alpha
Helix 25
25
C
117 119Right-handed 310
Helix 26
26
C
123 131Right-handed alpha
Helix 27
27
C
139 149Right-handed alpha
Helix 28
28
C
165 177Right-handed alpha
Helix 29
29
D
16 25Right-handed alpha
Helix 30
30
D
62 71Right-handed 310
Helix 31
31
D
87 95Right-handed alpha
Helix 32
32
D
97 104Right-handed alpha
Helix 33
33
D
117 121Right-handed 310
Helix 34
34
D
123 131Right-handed alpha
Helix 35
35
D
139 148Right-handed alpha
Helix 36
36
D
165 176Right-handed alpha
Helix 37
37
A
1696 1713Right-handed alpha
Helix 38
38
A
1716 1737Right-handed alpha
Helix 39
39
A
1773 1775Right-handed 310
Helix 40
40
A
1777 1780Right-handed 310
Helix 41
41
A
1785 1790Right-handed 310
Helix 42
42
A
1806 1822Right-handed alpha
Helix 43
43
A
1826 1842Right-handed 310
Helix 44
44
A
1846 1866Right-handed alpha
Helix 45
45
A
1906 1920Right-handed alpha
Helix 46
46
A
1937 1939Right-handed 310
Helix 47
47
A
1958 1963Right-handed alpha
Helix 48
48
A
1967 1971Right-handed alpha
Helix 49
49
A
2028 2047Right-handed alpha
Helix 50
50
A
2054 2065Right-handed alpha
Helix 51
51
A
2073 2080Right-handed alpha
Helix 52
52
A
2083 2088Right-handed alpha
Helix 53
53
A
2091 2117Right-handed alpha
Helix 54
54
A
2121 2144Right-handed 310
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There are 6 sheets in PDB entry 6TKY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1926 1929first strand
Strand 2
B
1945 1952parallel
Strand 3
B
1876 1883anti-parallel
Strand 4
B
1895 1900anti-parallel
Strand 5
B
2015 2017anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1976 1983first strand
Strand 2
B
1997 2005anti-parallel
Strand 3
B
2018 2026anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 156first strand
Strand 2
C
110 115parallel
Strand 3
C
77 83parallel
Strand 4
C
3 10parallel
Strand 5
C
49 57parallel
Strand 6
C
40 46anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 156first strand
Strand 2
D
109 115parallel
Strand 3
D
77 83parallel
Strand 4
D
3 10parallel
Strand 5
D
49 57parallel
Strand 6
D
40 46anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1926 1929first strand
Strand 2
A
1945 1952parallel
Strand 3
A
1876 1883anti-parallel
Strand 4
A
1894 1900anti-parallel
Strand 5
A
2015 2017anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1976 1984first strand
Strand 2
A
1996 2005anti-parallel
Strand 3
A
2018 2026anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il