Analysis of interatomic Contacts of Structural Units in PDB entry:
6TL1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TL1 entry

There are 2 chains in PDB entry 6TL1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 111ASP 329
B
 ALA 111LYS 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6TL1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 132Right-handed alpha
Helix 2
AA2
A
136 141Right-handed 310
Helix 3
AA3
A
153 170Right-handed alpha
Helix 4
AA4
A
173 178Right-handed 310
Helix 5
AA5
A
190 198Right-handed alpha
Helix 6
AA6
A
282 286Right-handed 310
Helix 7
AA7
A
293 298Right-handed alpha
Helix 8
AA8
B
120 132Right-handed alpha
Helix 9
AA9
B
136 141Right-handed 310
Helix 10
AB1
B
153 170Right-handed alpha
Helix 11
AB2
B
187 198Right-handed alpha
Helix 12
AB3
B
282 286Right-handed 310
Helix 13
AB4
B
293 298Right-handed alpha
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There are 4 sheets in PDB entry 6TL1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
143 151anti-parallel
Strand 3
A
317 327anti-parallel
Strand 4
A
235 243anti-parallel
Strand 5
A
180 186anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
299 302anti-parallel
Strand 3
A
277 280anti-parallel
Strand 4
A
248 251parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 115first strand
Strand 2
B
143 151anti-parallel
Strand 3
B
317 327anti-parallel
Strand 4
B
235 243anti-parallel
Strand 5
B
180 185anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 219first strand
Strand 2
B
299 302anti-parallel
Strand 3
B
277 280anti-parallel
Strand 4
B
248 251parallel
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