Analysis of interatomic Contacts of Structural Units in PDB entry:
6TL8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TL8 entry

There are 4 chains in PDB entry 6TL8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 16	CYS 278
B	ASP 14	CYS 278
C	LEU 16	GLU 279
D	LEU 16	ALA 284

There are 21 helices in PDB entry 6TL8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	64	68	Right-handed 310
Helix 2	AA2	A	140	144	Right-handed 310
Helix 3	AA3	A	161	166	Right-handed alpha
Helix 4	AA4	A	239	241	Right-handed 310
Helix 5	AA5	A	242	247	Right-handed alpha
Helix 6	AA6	A	272	276	Right-handed 310
Helix 7	AA7	B	64	68	Right-handed 310
Helix 8	AA8	B	161	166	Right-handed alpha
Helix 9	AA9	B	239	241	Right-handed 310
Helix 10	AB1	B	242	247	Right-handed alpha
Helix 11	AB2	B	272	276	Right-handed 310
Helix 12	AB3	C	64	68	Right-handed 310
Helix 13	AB4	C	161	166	Right-handed alpha
Helix 14	AB5	C	239	241	Right-handed 310
Helix 15	AB6	C	242	247	Right-handed alpha
Helix 16	AB7	C	272	276	Right-handed 310
Helix 17	AB8	D	64	69	Right-handed 310
Helix 18	AB9	D	161	166	Right-handed alpha
Helix 19	AC1	D	239	241	Right-handed 310
Helix 20	AC2	D	242	247	Right-handed alpha
Helix 21	AC3	D	272	276	Right-handed 310

There are 15 sheets in PDB entry 6TL8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	26	first strand
Strand 2	A	29	33	anti-parallel
Strand 3	A	50	54	parallel
Strand 4	A	76	78	parallel
Strand 5	A	100	102	parallel
Strand 6	A	124	126	parallel
Strand 7	A	149	151	parallel
Strand 8	A	173	175	parallel
Strand 9	A	197	199	parallel
Strand 10	A	229	230	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	63	first strand
Strand 2	A	86	87	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	134	135	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	237	first strand
Strand 2	A	257	259	parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	23	first strand
Strand 2	B	31	33	anti-parallel
Strand 3	B	52	54	parallel
Strand 4	B	76	78	parallel
Strand 5	B	100	102	parallel
Strand 6	B	124	126	parallel
Strand 7	B	149	151	parallel
Strand 8	B	173	175	parallel
Strand 9	B	197	199	parallel
Strand 10	B	229	230	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	63	first strand
Strand 2	B	86	87	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	134	135	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	237	first strand
Strand 2	B	257	259	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	26	first strand
Strand 2	C	29	33	anti-parallel
Strand 3	C	50	54	parallel
Strand 4	C	76	78	parallel
Strand 5	C	100	102	parallel
Strand 6	C	124	126	parallel
Strand 7	C	149	151	parallel
Strand 8	C	173	175	parallel
Strand 9	C	197	199	parallel
Strand 10	C	228	230	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	63	first strand
Strand 2	C	86	87	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	134	135	parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	24	first strand
Strand 2	D	31	33	anti-parallel
Strand 3	D	52	54	parallel
Strand 4	D	76	78	parallel
Strand 5	D	100	102	parallel
Strand 6	D	124	126	parallel
Strand 7	D	149	151	parallel
Strand 8	D	173	175	parallel
Strand 9	D	197	199	parallel
Strand 10	D	229	230	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	63	first strand
Strand 2	D	86	87	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	111	first strand
Strand 2	D	134	135	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	237	first strand
Strand 2	D	257	259	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TL8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TL8