Analysis of interatomic Contacts of Structural Units in PDB entry:
6TL9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TL9 entry

There are 8 chains in PDB entry 6TL9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 141	LEU 270
B	HIS 141	ASN 269
C	HIS 141	ASN 269
D	HIS 141	LEU 270
E	HIS 141	LEU 270
F	HIS 141	LEU 270
G	HIS 141	LEU 270
H	HIS 141	LEU 270

There are 16 helices in PDB entry 6TL9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	164	175	Right-handed alpha
Helix 2	AA2	A	184	195	Right-handed alpha
Helix 3	AA3	B	164	175	Right-handed alpha
Helix 4	AA4	B	184	195	Right-handed alpha
Helix 5	AA5	C	164	175	Right-handed alpha
Helix 6	AA6	C	184	195	Right-handed alpha
Helix 7	AA7	D	164	175	Right-handed alpha
Helix 8	AA8	D	184	195	Right-handed alpha
Helix 9	AA9	E	164	175	Right-handed alpha
Helix 10	AB1	E	184	195	Right-handed alpha
Helix 11	AB2	F	164	175	Right-handed alpha
Helix 12	AB3	F	184	195	Right-handed alpha
Helix 13	AB4	G	164	175	Right-handed alpha
Helix 14	AB5	G	184	195	Right-handed alpha
Helix 15	AB6	H	164	175	Right-handed alpha
Helix 16	AB7	H	184	195	Right-handed alpha

There are 16 sheets in PDB entry 6TL9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	151	first strand
Strand 2	A	154	158	anti-parallel
Strand 3	A	261	267	anti-parallel
Strand 4	A	178	179	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	151	first strand
Strand 2	A	154	158	anti-parallel
Strand 3	A	261	267	anti-parallel
Strand 4	A	202	208	parallel
Strand 5	A	242	247	anti-parallel
Strand 6	A	250	255	anti-parallel
Strand 7	A	230	232	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	151	first strand
Strand 2	B	154	158	anti-parallel
Strand 3	B	261	267	anti-parallel
Strand 4	B	178	179	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	151	first strand
Strand 2	B	154	158	anti-parallel
Strand 3	B	261	267	anti-parallel
Strand 4	B	202	208	parallel
Strand 5	B	242	247	anti-parallel
Strand 6	B	250	255	anti-parallel
Strand 7	B	231	232	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	151	first strand
Strand 2	C	154	158	anti-parallel
Strand 3	C	261	267	anti-parallel
Strand 4	C	178	179	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	151	first strand
Strand 2	C	154	158	anti-parallel
Strand 3	C	261	267	anti-parallel
Strand 4	C	202	208	parallel
Strand 5	C	242	247	anti-parallel
Strand 6	C	250	255	anti-parallel
Strand 7	C	230	231	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	151	first strand
Strand 2	D	154	158	anti-parallel
Strand 3	D	261	267	anti-parallel
Strand 4	D	178	179	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	151	first strand
Strand 2	D	154	158	anti-parallel
Strand 3	D	261	267	anti-parallel
Strand 4	D	202	208	parallel
Strand 5	D	242	247	anti-parallel
Strand 6	D	250	255	anti-parallel
Strand 7	D	231	232	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	151	first strand
Strand 2	E	154	158	anti-parallel
Strand 3	E	261	267	anti-parallel
Strand 4	E	178	179	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	151	first strand
Strand 2	E	154	158	anti-parallel
Strand 3	E	261	267	anti-parallel
Strand 4	E	202	208	parallel
Strand 5	E	242	247	anti-parallel
Strand 6	E	250	255	anti-parallel
Strand 7	E	230	232	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	151	first strand
Strand 2	F	154	158	anti-parallel
Strand 3	F	261	267	anti-parallel
Strand 4	F	178	179	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	151	first strand
Strand 2	F	154	158	anti-parallel
Strand 3	F	261	267	anti-parallel
Strand 4	F	202	208	parallel
Strand 5	F	242	247	anti-parallel
Strand 6	F	250	255	anti-parallel
Strand 7	F	230	231	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	149	151	first strand
Strand 2	G	154	158	anti-parallel
Strand 3	G	261	267	anti-parallel
Strand 4	G	202	208	parallel
Strand 5	G	216	217	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	178	179	first strand
Strand 2	G	261	267	anti-parallel
Strand 3	G	202	208	parallel
Strand 4	G	242	247	anti-parallel
Strand 5	G	250	255	anti-parallel
Strand 6	G	230	232	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	151	first strand
Strand 2	H	154	158	anti-parallel
Strand 3	H	261	267	anti-parallel
Strand 4	H	178	179	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	151	first strand
Strand 2	H	154	158	anti-parallel
Strand 3	H	261	267	anti-parallel
Strand 4	H	202	208	parallel
Strand 5	H	242	247	anti-parallel
Strand 6	H	250	255	anti-parallel
Strand 7	H	230	232	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TL9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TL9