Analysis of interatomic Contacts of Structural Units in PDB entry:
6TLZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TLZ entry

There are 2 chains in PDB entry 6TLZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	LYS 996
B	SER 23	ILE 676

There are 38 helices in PDB entry 6TLZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	56	Right-handed alpha
Helix 2	AA2	A	107	115	Right-handed alpha
Helix 3	AA3	A	179	185	Right-handed alpha
Helix 4	AA4	A	197	201	Right-handed 310
Helix 5	AA5	A	208	214	Right-handed alpha
Helix 6	AA6	A	225	230	Right-handed alpha
Helix 7	AA7	A	274	281	Right-handed alpha
Helix 8	AA8	A	281	290	Right-handed alpha
Helix 9	AA9	A	381	387	Right-handed alpha
Helix 10	AB1	A	467	476	Right-handed alpha
Helix 11	AB2	A	524	533	Right-handed alpha
Helix 12	AB3	A	612	618	Right-handed alpha
Helix 13	AB4	A	663	667	Right-handed 310
Helix 14	AB5	A	687	696	Right-handed alpha
Helix 15	AB6	A	723	734	Right-handed alpha
Helix 16	AB7	A	758	762	Right-handed 310
Helix 17	AB8	A	862	867	Right-handed alpha
Helix 18	AB9	A	892	894	Right-handed 310
Helix 19	AC1	A	988	996	Right-handed alpha
Helix 20	AC2	B	52	56	Right-handed alpha
Helix 21	AC3	B	107	115	Right-handed alpha
Helix 22	AC4	B	178	185	Right-handed alpha
Helix 23	AC5	B	197	201	Right-handed 310
Helix 24	AC6	B	208	214	Right-handed alpha
Helix 25	AC7	B	225	230	Right-handed alpha
Helix 26	AC8	B	274	281	Right-handed alpha
Helix 27	AC9	B	281	290	Right-handed alpha
Helix 28	AD1	B	381	387	Right-handed alpha
Helix 29	AD2	B	467	476	Right-handed alpha
Helix 30	AD3	B	524	533	Right-handed alpha
Helix 31	AD4	B	612	618	Right-handed alpha
Helix 32	AD5	B	663	667	Right-handed 310
Helix 33	AD6	B	687	696	Right-handed alpha
Helix 34	AD7	B	723	734	Right-handed alpha
Helix 35	AD8	B	758	762	Right-handed 310
Helix 36	AD9	B	862	867	Right-handed alpha
Helix 37	AE1	B	892	894	Right-handed 310
Helix 38	AE2	B	989	996	Right-handed alpha

There are 30 sheets in PDB entry 6TLZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	35	40	anti-parallel
Strand 3	A	44	45	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	35	40	anti-parallel
Strand 3	A	50	51	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	70	first strand
Strand 2	A	74	81	anti-parallel
Strand 3	A	136	143	anti-parallel
Strand 4	A	147	155	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	88	first strand
Strand 2	A	104	106	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	597	599	anti-parallel
Strand 3	A	581	585	anti-parallel
Strand 4	A	672	676	anti-parallel
Strand 5	A	186	189	parallel
Strand 6	A	251	252	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	263	first strand
Strand 2	A	378	380	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	483	first strand
Strand 2	A	486	490	anti-parallel
Strand 3	A	499	504	anti-parallel
Strand 4	A	513	514	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	518	520	first strand
Strand 2	A	745	747	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	560	568	first strand
Strand 2	A	571	578	anti-parallel
Strand 3	A	715	722	anti-parallel
Strand 4	A	750	754	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	631	633	first strand
Strand 2	A	636	638	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	805	first strand
Strand 2	A	822	827	anti-parallel
Strand 3	A	830	837	anti-parallel
Strand 4	A	842	843	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	802	805	first strand
Strand 2	A	822	827	anti-parallel
Strand 3	A	830	837	anti-parallel
Strand 4	A	856	860	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	873	879	first strand
Strand 2	A	884	890	anti-parallel
Strand 3	A	910	917	anti-parallel
Strand 4	A	937	940	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	873	879	first strand
Strand 2	A	884	890	anti-parallel
Strand 3	A	910	917	anti-parallel
Strand 4	A	945	946	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	951	955	first strand
Strand 2	A	961	966	anti-parallel
Strand 3	A	974	979	anti-parallel
Strand 4	A	986	987	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	44	45	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	50	51	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	70	first strand
Strand 2	B	74	81	anti-parallel
Strand 3	B	136	143	anti-parallel
Strand 4	B	147	155	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	88	first strand
Strand 2	B	104	106	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	244	first strand
Strand 2	B	597	599	anti-parallel
Strand 3	B	581	585	anti-parallel
Strand 4	B	672	676	anti-parallel
Strand 5	B	186	189	parallel
Strand 6	B	251	252	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	263	first strand
Strand 2	B	378	380	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	483	first strand
Strand 2	B	486	490	anti-parallel
Strand 3	B	499	504	anti-parallel
Strand 4	B	513	514	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	520	first strand
Strand 2	B	745	747	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	560	568	first strand
Strand 2	B	571	578	anti-parallel
Strand 3	B	715	722	anti-parallel
Strand 4	B	750	754	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	631	633	first strand
Strand 2	B	636	638	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	805	first strand
Strand 2	B	822	827	anti-parallel
Strand 3	B	830	837	anti-parallel
Strand 4	B	842	843	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	805	first strand
Strand 2	B	822	827	anti-parallel
Strand 3	B	830	837	anti-parallel
Strand 4	B	856	860	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	879	first strand
Strand 2	B	884	890	anti-parallel
Strand 3	B	910	917	anti-parallel
Strand 4	B	937	940	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	879	first strand
Strand 2	B	884	890	anti-parallel
Strand 3	B	910	917	anti-parallel
Strand 4	B	945	946	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	951	955	first strand
Strand 2	B	961	966	anti-parallel
Strand 3	B	974	979	anti-parallel
Strand 4	B	986	988	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TLZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TLZ