Analysis of interatomic Contacts of Structural Units in PDB entry:
6TMD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TMD entry

There is 1 chain in PDB entry 6TMD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 590ILE 831
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6TMD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
591 607Right-handed alpha
Helix 2
AA2
A
612 627Right-handed alpha
Helix 3
AA3
A
627 632Right-handed alpha
Helix 4
AA4
A
637 650Right-handed alpha
Helix 5
AA5
A
652 661Right-handed alpha
Helix 6
AA6
A
669 677Right-handed alpha
Helix 7
AA7
A
679 689Right-handed alpha
Helix 8
AA8
A
703 708Right-handed alpha
Helix 9
AA9
A
709 711Right-handed 310
Helix 10
AB1
A
715 729Right-handed alpha
Helix 11
AB2
A
741 749Right-handed alpha
Helix 12
AB3
A
751 761Right-handed alpha
Helix 13
AB4
A
774 783Right-handed alpha
Helix 14
AB5
A
784 793Right-handed alpha
Helix 15
AB6
A
808 816Right-handed alpha
Helix 16
AB7
A
818 829Right-handed alpha
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There are no sheets in PDB entry 6TMD
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