Analysis of interatomic Contacts of Structural Units in PDB entry:
6TNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TNO entry

There are 6 chains in PDB entry 6TNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 211GLY 277
B
 ILE 226ARG 232
C
 THR 211GLY 277
D
 ILE 226ARG 232
E
 THR 211GLY 277
F
 ARG 225ARG 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6TNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
216 232Right-handed alpha
Helix 2
AA2
A
234 242Right-handed alpha
Helix 3
AA3
A
243 247Right-handed 310
Helix 4
AA4
A
248 258Right-handed alpha
Helix 5
AA5
A
259 261Right-handed 310
Helix 6
AA6
A
263 277Right-handed alpha
Helix 7
AA7
C
216 232Right-handed alpha
Helix 8
AA8
C
234 242Right-handed alpha
Helix 9
AA9
C
248 258Right-handed alpha
Helix 10
AB1
C
263 276Right-handed alpha
Helix 11
AB2
E
216 232Right-handed alpha
Helix 12
AB3
E
234 242Right-handed alpha
Helix 13
AB4
E
248 258Right-handed alpha
Helix 14
AB5
E
259 261Right-handed 310
Helix 15
AB6
E
263 276Right-handed alpha
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There are 3 sheets in PDB entry 6TNO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
B
227 229parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
212 214first strand
Strand 2
D
227 230parallel
Strand 3
C
246 247parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
212 214first strand
Strand 2
F
227 230parallel
Strand 3
E
246 247parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il