Analysis of interatomic Contacts of Structural Units in PDB entry:
6TO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TO0 entry

There are 2 chains in PDB entry 6TO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6ALA 385
B
 LYS 6ALA 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6TO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 12Right-handed alpha
Helix 2
AA2
A
16 21Right-handed alpha
Helix 3
AA3
A
24 42Right-handed alpha
Helix 4
AA4
A
69 82Right-handed alpha
Helix 5
AA5
A
84 99Right-handed alpha
Helix 6
AA6
A
126 145Right-handed alpha
Helix 7
AA7
A
152 167Right-handed alpha
Helix 8
AA8
A
194 198Right-handed 310
Helix 9
AA9
A
199 210Right-handed alpha
Helix 10
AB1
A
211 213Right-handed 310
Helix 11
AB2
A
214 233Right-handed alpha
Helix 12
AB3
A
263 266Right-handed 310
Helix 13
AB4
A
267 281Right-handed alpha
Helix 14
AB5
A
284 298Right-handed alpha
Helix 15
AB6
A
301 304Right-handed 310
Helix 16
AB7
A
321 332Right-handed alpha
Helix 17
AB8
A
333 335Right-handed 310
Helix 18
AB9
A
340 350Right-handed alpha
Helix 19
AC1
A
358 374Right-handed alpha
Helix 20
AC2
B
7 12Right-handed alpha
Helix 21
AC3
B
16 21Right-handed alpha
Helix 22
AC4
B
24 42Right-handed alpha
Helix 23
AC5
B
69 82Right-handed alpha
Helix 24
AC6
B
84 99Right-handed alpha
Helix 25
AC7
B
126 145Right-handed alpha
Helix 26
AC8
B
152 167Right-handed alpha
Helix 27
AC9
B
194 198Right-handed 310
Helix 28
AD1
B
199 210Right-handed alpha
Helix 29
AD2
B
211 213Right-handed 310
Helix 30
AD3
B
214 233Right-handed alpha
Helix 31
AD4
B
263 266Right-handed 310
Helix 32
AD5
B
267 281Right-handed alpha
Helix 33
AD6
B
284 298Right-handed alpha
Helix 34
AD7
B
301 304Right-handed 310
Helix 35
AD8
B
321 332Right-handed alpha
Helix 36
AD9
B
333 335Right-handed 310
Helix 37
AE1
B
340 350Right-handed alpha
Helix 38
AE2
B
358 374Right-handed alpha
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There are 4 sheets in PDB entry 6TO0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
56 61anti-parallel
Strand 3
A
66 68anti-parallel
Strand 4
A
113 114anti-parallel
Strand 5
A
120 122anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
314 318anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
56 61anti-parallel
Strand 3
B
66 68anti-parallel
Strand 4
B
113 114anti-parallel
Strand 5
B
120 122anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 308first strand
Strand 2
B
314 318anti-parallel
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