Analysis of interatomic Contacts of Structural Units in PDB entry:
6TO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TO1 entry

There is 1 chain in PDB entry 6TO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 99TRP 664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6TO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 158Right-handed 310
Helix 2
AA2
A
159 178Right-handed alpha
Helix 3
AA3
A
180 184Right-handed 310
Helix 4
AA4
A
207 217Right-handed alpha
Helix 5
AA5
A
225 238Right-handed alpha
Helix 6
AA6
A
265 267Right-handed 310
Helix 7
AA7
A
278 290Right-handed alpha
Helix 8
AA8
A
290 295Right-handed alpha
Helix 9
AA9
A
320 324Right-handed 310
Helix 10
AB1
A
356 371Right-handed alpha
Helix 11
AB2
A
385 396Right-handed alpha
Helix 12
AB3
A
398 400Right-handed 310
Helix 13
AB4
A
406 413Right-handed alpha
Helix 14
AB5
A
450 453Right-handed 310
Helix 15
AB6
A
491 498Right-handed alpha
Helix 16
AB7
A
573 577Right-handed 310
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There are 10 sheets in PDB entry 6TO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 115first strand
Strand 2
A
127 136anti-parallel
Strand 3
A
480 490anti-parallel
Strand 4
A
438 440anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 115first strand
Strand 2
A
127 136anti-parallel
Strand 3
A
480 490anti-parallel
Strand 4
A
454 455anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 205first strand
Strand 2
A
187 194anti-parallel
Strand 3
A
143 150parallel
Strand 4
A
244 251parallel
Strand 5
A
374 379parallel
Strand 6
A
402 404parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
313 315anti-parallel
Strand 3
A
353 355parallel
Strand 4
A
343 344anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
459 463anti-parallel
Strand 3
A
468 472anti-parallel
Strand 4
A
423 434anti-parallel
Strand 5
A
476 477anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
459 463anti-parallel
Strand 3
A
468 472anti-parallel
Strand 4
A
423 434anti-parallel
Strand 5
A
518 527anti-parallel
Strand 6
A
534 537anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 516first strand
Strand 2
A
542 543anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
579 585first strand
Strand 2
A
547 556anti-parallel
Strand 3
A
599 600anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
579 585first strand
Strand 2
A
547 556anti-parallel
Strand 3
A
651 660parallel
Strand 4
A
627 631anti-parallel
Strand 5
A
619 621anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 613first strand
Strand 2
A
641 645anti-parallel
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