Analysis of interatomic Contacts of Structural Units in PDB entry:
6TPL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TPL entry

There are 2 chains in PDB entry 6TPL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 555	THR 752
B	VAL 558	THR 752

There are no helices in PDB entry 6TPL

There are 16 sheets in PDB entry 6TPL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	565	first strand
Strand 2	A	578	586	anti-parallel
Strand 3	A	589	590	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	565	first strand
Strand 2	A	578	586	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	571	first strand
Strand 2	A	650	653	parallel
Strand 3	A	630	637	anti-parallel
Strand 4	A	595	602	anti-parallel
Strand 5	A	611	613	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	571	first strand
Strand 2	A	650	653	parallel
Strand 3	A	630	637	anti-parallel
Strand 4	A	645	646	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	665	first strand
Strand 2	A	678	686	anti-parallel
Strand 3	A	689	690	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	665	first strand
Strand 2	A	678	686	anti-parallel
Strand 3	A	717	723	anti-parallel
Strand 4	A	704	705	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	669	671	first strand
Strand 2	A	748	751	parallel
Strand 3	A	728	730	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	711	first strand
Strand 2	A	695	700	anti-parallel
Strand 3	A	732	735	anti-parallel
Strand 4	A	743	744	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	565	first strand
Strand 2	B	578	586	anti-parallel
Strand 3	B	589	590	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	565	first strand
Strand 2	B	578	586	anti-parallel
Strand 3	B	619	625	anti-parallel
Strand 4	B	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	571	first strand
Strand 2	B	650	653	parallel
Strand 3	B	630	637	anti-parallel
Strand 4	B	595	602	anti-parallel
Strand 5	B	611	613	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	571	first strand
Strand 2	B	650	653	parallel
Strand 3	B	630	637	anti-parallel
Strand 4	B	645	646	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	665	first strand
Strand 2	B	678	686	anti-parallel
Strand 3	B	689	690	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	665	first strand
Strand 2	B	678	686	anti-parallel
Strand 3	B	717	723	anti-parallel
Strand 4	B	704	705	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	669	671	first strand
Strand 2	B	748	751	parallel
Strand 3	B	728	730	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	709	711	first strand
Strand 2	B	695	700	anti-parallel
Strand 3	B	732	735	anti-parallel
Strand 4	B	743	744	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TPL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TPL