Analysis of interatomic Contacts of Structural Units in PDB entry:
6TQE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TQE entry

There are 2 chains in PDB entry 6TQE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 634
B
 MET 1ALA 634
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 6TQE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 44Right-handed alpha
Helix 2
AA2
A
48 55Right-handed alpha
Helix 3
AA3
A
61 65Right-handed 310
Helix 4
AA4
A
66 109Right-handed alpha
Helix 5
AA5
A
117 122Right-handed alpha
Helix 6
AA6
A
123 128Right-handed alpha
Helix 7
AA7
A
132 140Right-handed alpha
Helix 8
AA8
A
142 147Right-handed alpha
Helix 9
AA9
A
150 166Right-handed alpha
Helix 10
AB1
A
172 177Right-handed 310
Helix 11
AB2
A
185 190Right-handed alpha
Helix 12
AB3
A
192 198Right-handed alpha
Helix 13
AB4
A
209 213Right-handed 310
Helix 14
AB5
A
215 227Right-handed alpha
Helix 15
AB6
A
248 265Right-handed alpha
Helix 16
AB7
A
277 283Right-handed alpha
Helix 17
AB8
A
287 295Right-handed alpha
Helix 18
AB9
A
296 304Right-handed alpha
Helix 19
AC1
A
308 323Right-handed alpha
Helix 20
AC2
A
348 353Right-handed alpha
Helix 21
AC3
A
354 359Right-handed alpha
Helix 22
AC4
A
364 382Right-handed alpha
Helix 23
AC5
A
382 387Right-handed alpha
Helix 24
AC6
A
388 396Right-handed alpha
Helix 25
AC7
A
398 406Right-handed alpha
Helix 26
AC8
A
467 473Right-handed alpha
Helix 27
AC9
A
521 525Right-handed 310
Helix 28
AD1
A
526 531Right-handed alpha
Helix 29
AD2
A
532 533Right-handed 310
Helix 30
AD3
A
534 538Right-handed 310
Helix 31
AD4
A
559 566Right-handed alpha
Helix 32
AD5
A
585 597Right-handed alpha
Helix 33
AD6
A
611 615Right-handed 310
Helix 34
AD7
B
20 44Right-handed alpha
Helix 35
AD8
B
48 55Right-handed alpha
Helix 36
AD9
B
61 65Right-handed 310
Helix 37
AE1
B
66 109Right-handed alpha
Helix 38
AE2
B
117 122Right-handed alpha
Helix 39
AE3
B
123 128Right-handed alpha
Helix 40
AE4
B
132 140Right-handed alpha
Helix 41
AE5
B
142 147Right-handed alpha
Helix 42
AE6
B
150 166Right-handed alpha
Helix 43
AE7
B
172 177Right-handed 310
Helix 44
AE8
B
185 190Right-handed alpha
Helix 45
AE9
B
192 198Right-handed alpha
Helix 46
AF1
B
209 213Right-handed 310
Helix 47
AF2
B
215 227Right-handed alpha
Helix 48
AF3
B
248 265Right-handed alpha
Helix 49
AF4
B
277 283Right-handed alpha
Helix 50
AF5
B
287 295Right-handed alpha
Helix 51
AF6
B
296 304Right-handed alpha
Helix 52
AF7
B
308 323Right-handed alpha
Helix 53
AF8
B
348 353Right-handed alpha
Helix 54
AF9
B
354 359Right-handed alpha
Helix 55
AG1
B
364 382Right-handed alpha
Helix 56
AG2
B
382 387Right-handed alpha
Helix 57
AG3
B
388 396Right-handed alpha
Helix 58
AG4
B
398 406Right-handed alpha
Helix 59
AG5
B
467 473Right-handed alpha
Helix 60
AG6
B
521 525Right-handed 310
Helix 61
AG7
B
526 531Right-handed alpha
Helix 62
AG8
B
532 533Right-handed 310
Helix 63
AG9
B
534 538Right-handed 310
Helix 64
AH1
B
559 566Right-handed alpha
Helix 65
AH2
B
585 597Right-handed alpha
Helix 66
AH3
B
611 615Right-handed 310
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There are 6 sheets in PDB entry 6TQE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 421first strand
Strand 2
A
480 486parallel
Strand 3
A
432 435anti-parallel
Strand 4
A
441 443anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
A
448 450anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 575first strand
Strand 2
A
602 605parallel
Strand 3
A
455 459parallel
Strand 4
A
617 621parallel
Strand 5
A
627 631anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 421first strand
Strand 2
B
480 486parallel
Strand 3
B
432 435anti-parallel
Strand 4
B
441 443anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
427 429first strand
Strand 2
B
448 450anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
573 575first strand
Strand 2
B
602 605parallel
Strand 3
B
455 459parallel
Strand 4
B
617 621parallel
Strand 5
B
627 631anti-parallel
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