Analysis of interatomic Contacts of Structural Units in PDB entry:
6TQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TQS entry

There are 11 chains in PDB entry 6TQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 317SER 447
B
 PHE 316SER 447
C
 ALA 315GLU 446
D
 LEU 320SER 448
E
 PRO 319SER 447
F
 PHE 316VAL 445
G
 ASP 474SER 481
H
 GLU 475SER 481
I
 ASP 474SER 481
J
 ASP 474SER 481
K
 GLU 475SER 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6TQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
420 429Right-handed alpha
Helix 2
2
A
432 434Right-handed 310
Helix 3
3
B
420 429Right-handed alpha
Helix 4
4
B
432 434Right-handed 310
Helix 5
5
C
420 429Right-handed alpha
Helix 6
6
C
432 434Right-handed 310
Helix 7
7
D
420 429Right-handed alpha
Helix 8
8
D
432 434Right-handed 310
Helix 9
9
E
420 429Right-handed alpha
Helix 10
10
E
432 434Right-handed 310
Helix 11
11
F
420 429Right-handed alpha
Helix 12
12
F
432 434Right-handed 310
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There are 12 sheets in PDB entry 6TQS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 331first strand
Strand 2
A
348 354anti-parallel
Strand 3
A
386 393anti-parallel
Strand 4
A
372 375anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 381first strand
Strand 2
A
360 366anti-parallel
Strand 3
A
404 411anti-parallel
Strand 4
A
436 441anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 331first strand
Strand 2
B
348 354anti-parallel
Strand 3
B
386 393anti-parallel
Strand 4
B
372 375anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 337first strand
Strand 2
B
435 443parallel
Strand 3
B
404 411anti-parallel
Strand 4
B
360 366anti-parallel
Strand 5
B
378 381anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
328 331first strand
Strand 2
C
348 354anti-parallel
Strand 3
C
386 393anti-parallel
Strand 4
C
372 375anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
378 381first strand
Strand 2
C
360 366anti-parallel
Strand 3
C
404 411anti-parallel
Strand 4
C
436 441anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
328 331first strand
Strand 2
D
348 354anti-parallel
Strand 3
D
386 393anti-parallel
Strand 4
D
372 375anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
378 381first strand
Strand 2
D
360 366anti-parallel
Strand 3
D
404 411anti-parallel
Strand 4
D
436 441anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
328 331first strand
Strand 2
E
348 354anti-parallel
Strand 3
E
386 393anti-parallel
Strand 4
E
372 375anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
378 381first strand
Strand 2
E
360 366anti-parallel
Strand 3
E
404 411anti-parallel
Strand 4
E
435 441anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
328 331first strand
Strand 2
F
348 354anti-parallel
Strand 3
F
386 393anti-parallel
Strand 4
F
372 375anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
378 381first strand
Strand 2
F
360 366anti-parallel
Strand 3
F
404 411anti-parallel
Strand 4
F
436 441anti-parallel
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