Analysis of interatomic Contacts of Structural Units in PDB entry:
6TR3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TR3 entry

There is 1 chain in PDB entry 6TR3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 23LYS 527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6TR3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 55Right-handed alpha
Helix 2
AA2
A
63 68Right-handed 310
Helix 3
AA3
A
80 85Right-handed alpha
Helix 4
AA4
A
92 103Right-handed alpha
Helix 5
AA5
A
129 134Right-handed alpha
Helix 6
AA6
A
143 155Right-handed alpha
Helix 7
AA7
A
184 188Right-handed 310
Helix 8
AA8
A
191 205Right-handed alpha
Helix 9
AA9
A
210 214Right-handed 310
Helix 10
AB1
A
234 247Right-handed alpha
Helix 11
AB2
A
248 251Right-handed 310
Helix 12
AB3
A
261 265Right-handed 310
Helix 13
AB4
A
336 347Right-handed alpha
Helix 14
AB5
A
348 351Right-handed 310
Helix 15
AB6
A
367 385Right-handed alpha
Helix 16
AB7
A
388 392Right-handed 310
Helix 17
AB8
A
402 415Right-handed 310
Helix 18
AB9
A
453 456Right-handed 310
Helix 19
AC1
A
522 526Right-handed 310
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There are 5 sheets in PDB entry 6TR3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 259first strand
Strand 2
A
217 219parallel
Strand 3
A
158 163parallel
Strand 4
A
107 113parallel
Strand 5
A
56 60parallel
Strand 6
A
353 357parallel
Strand 7
A
314 320parallel
Strand 8
A
267 269parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
284 288anti-parallel
Strand 3
A
311 312anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
302 303anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 399first strand
Strand 2
A
431 451anti-parallel
Strand 3
A
512 519anti-parallel
Strand 4
A
423 424anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 399first strand
Strand 2
A
431 451anti-parallel
Strand 3
A
487 504anti-parallel
Strand 4
A
461 467anti-parallel
Strand 5
A
475 480anti-parallel
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