Analysis of interatomic Contacts of Structural Units in PDB entry:
6TS8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TS8 entry

There is 1 chain in PDB entry 6TS8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 28	MET 1403

There are 82 helices in PDB entry 6TS8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	52	Right-handed alpha
Helix 2	AA2	A	56	63	Right-handed alpha
Helix 3	AA3	A	71	75	Right-handed 310
Helix 4	AA4	A	78	92	Right-handed alpha
Helix 5	AA5	A	99	109	Right-handed alpha
Helix 6	AA6	A	112	126	Right-handed alpha
Helix 7	AA7	A	193	207	Right-handed alpha
Helix 8	AA8	A	293	302	Right-handed alpha
Helix 9	AA9	A	308	316	Right-handed alpha
Helix 10	AB1	A	367	372	Right-handed alpha
Helix 11	AB2	A	375	386	Right-handed alpha
Helix 12	AB3	A	391	399	Right-handed alpha
Helix 13	AB4	A	447	452	Right-handed alpha
Helix 14	AB5	A	476	485	Right-handed alpha
Helix 15	AB6	A	485	493	Right-handed alpha
Helix 16	AB7	A	508	513	Right-handed alpha
Helix 17	AB8	A	514	524	Right-handed alpha
Helix 18	AB9	A	525	540	Right-handed alpha
Helix 19	AC1	A	547	557	Right-handed alpha
Helix 20	AC2	A	577	590	Right-handed alpha
Helix 21	AC3	A	613	634	Right-handed alpha
Helix 22	AC4	A	671	676	Right-handed alpha
Helix 23	AC5	A	714	728	Right-handed alpha
Helix 24	AC6	A	746	755	Right-handed alpha
Helix 25	AC7	A	765	773	Right-handed alpha
Helix 26	AC8	A	781	796	Right-handed alpha
Helix 27	AC9	A	821	836	Right-handed alpha
Helix 28	AD1	A	836	846	Right-handed alpha
Helix 29	AD2	A	854	866	Right-handed alpha
Helix 30	AD3	A	866	871	Right-handed alpha
Helix 31	AD4	A	922	935	Right-handed alpha
Helix 32	AD5	A	1017	1025	Right-handed alpha
Helix 33	AD6	A	1098	1102	Right-handed alpha
Helix 34	AD7	A	1208	1221	Right-handed alpha
Helix 35	AD8	A	1240	1245	Right-handed alpha
Helix 36	AD9	A	1246	1254	Right-handed alpha
Helix 37	AE1	A	1274	1285	Right-handed alpha
Helix 38	AE2	A	1311	1316	Right-handed alpha
Helix 39	AE3	A	1367	1372	Right-handed alpha
Helix 40	AE4	A	1373	1385	Right-handed alpha
Helix 41	AE5	A	1398	1403	Right-handed alpha
Helix 42	AE6	B	43	52	Right-handed alpha
Helix 43	AE7	B	56	63	Right-handed alpha
Helix 44	AE8	B	71	75	Right-handed 310
Helix 45	AE9	B	78	92	Right-handed alpha
Helix 46	AF1	B	99	109	Right-handed alpha
Helix 47	AF2	B	112	126	Right-handed alpha
Helix 48	AF3	B	193	207	Right-handed alpha
Helix 49	AF4	B	293	302	Right-handed alpha
Helix 50	AF5	B	308	316	Right-handed alpha
Helix 51	AF6	B	367	372	Right-handed alpha
Helix 52	AF7	B	375	386	Right-handed alpha
Helix 53	AF8	B	391	399	Right-handed alpha
Helix 54	AF9	B	447	452	Right-handed alpha
Helix 55	AG1	B	476	485	Right-handed alpha
Helix 56	AG2	B	485	493	Right-handed alpha
Helix 57	AG3	B	508	513	Right-handed alpha
Helix 58	AG4	B	514	524	Right-handed alpha
Helix 59	AG5	B	525	540	Right-handed alpha
Helix 60	AG6	B	547	557	Right-handed alpha
Helix 61	AG7	B	577	590	Right-handed alpha
Helix 62	AG8	B	613	634	Right-handed alpha
Helix 63	AG9	B	671	676	Right-handed alpha
Helix 64	AH1	B	714	728	Right-handed alpha
Helix 65	AH2	B	746	755	Right-handed alpha
Helix 66	AH3	B	765	773	Right-handed alpha
Helix 67	AH4	B	781	796	Right-handed alpha
Helix 68	AH5	B	821	836	Right-handed alpha
Helix 69	AH6	B	836	846	Right-handed alpha
Helix 70	AH7	B	854	866	Right-handed alpha
Helix 71	AH8	B	866	871	Right-handed alpha
Helix 72	AH9	B	922	935	Right-handed alpha
Helix 73	AI1	B	1017	1025	Right-handed alpha
Helix 74	AI2	B	1098	1102	Right-handed alpha
Helix 75	AI3	B	1208	1221	Right-handed alpha
Helix 76	AI4	B	1240	1245	Right-handed alpha
Helix 77	AI5	B	1246	1254	Right-handed alpha
Helix 78	AI6	B	1274	1285	Right-handed alpha
Helix 79	AI7	B	1311	1316	Right-handed alpha
Helix 80	AI8	B	1367	1372	Right-handed alpha
Helix 81	AI9	B	1373	1385	Right-handed alpha
Helix 82	AJ1	B	1398	1403	Right-handed alpha

There are 22 sheets in PDB entry 6TS8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	227	first strand
Strand 2	A	31	40	anti-parallel
Strand 3	A	1033	1044	parallel
Strand 4	A	1002	1008	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	980	983	first strand
Strand 2	A	31	40	anti-parallel
Strand 3	A	1033	1044	parallel
Strand 4	A	1080	1085	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	142	144	anti-parallel
Strand 3	A	183	185	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	238	first strand
Strand 2	A	992	997	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	355	first strand
Strand 2	A	358	359	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	498	503	anti-parallel
Strand 3	A	467	472	parallel
Strand 4	A	600	602	anti-parallel
Strand 5	A	606	607	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	706	first strand
Strand 2	A	802	804	anti-parallel
Strand 3	A	811	814	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1070	1071	first strand
Strand 2	A	1059	1062	anti-parallel
Strand 3	A	1088	1094	anti-parallel
Strand 4	A	1123	1126	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1103	1105	first strand
Strand 2	A	1138	1140	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1200	1202	first strand
Strand 2	A	1230	1232	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1297	1298	first strand
Strand 2	A	1364	1365	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	227	first strand
Strand 2	B	31	40	anti-parallel
Strand 3	B	1033	1044	parallel
Strand 4	B	1002	1008	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	980	983	first strand
Strand 2	B	31	40	anti-parallel
Strand 3	B	1033	1044	parallel
Strand 4	B	1080	1085	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	149	first strand
Strand 2	B	142	144	anti-parallel
Strand 3	B	183	185	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	238	first strand
Strand 2	B	992	997	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	358	359	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	430	first strand
Strand 2	B	498	503	anti-parallel
Strand 3	B	467	472	parallel
Strand 4	B	600	602	anti-parallel
Strand 5	B	606	607	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	705	706	first strand
Strand 2	B	802	804	anti-parallel
Strand 3	B	811	814	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1070	1071	first strand
Strand 2	B	1059	1062	anti-parallel
Strand 3	B	1088	1094	anti-parallel
Strand 4	B	1123	1126	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1103	1105	first strand
Strand 2	B	1138	1140	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1200	1202	first strand
Strand 2	B	1230	1232	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1297	1298	first strand
Strand 2	B	1364	1365	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TS8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TS8