Analysis of interatomic Contacts of Structural Units in PDB entry:
6TSW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TSW entry

There are 3 chains in PDB entry 6TSW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 89	ALA 385
C	ALA 89	ALA 385
A	ALA 89	ALA 385

There are 22 helices in PDB entry 6TSW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	179	186	Right-handed alpha
Helix 2	AA2	B	189	213	Right-handed alpha
Helix 3	AA3	B	255	264	Right-handed alpha
Helix 4	AA4	B	268	272	Right-handed 310
Helix 5	AA5	B	278	287	Right-handed alpha
Helix 6	AA6	B	334	338	Right-handed alpha
Helix 7	AA7	B	374	376	Right-handed 310
Helix 8	AA8	C	94	99	Right-handed alpha
Helix 9	AA9	C	179	186	Right-handed alpha
Helix 10	AB1	C	189	213	Right-handed alpha
Helix 11	AB2	C	255	263	Right-handed alpha
Helix 12	AB3	C	268	273	Right-handed 310
Helix 13	AB4	C	278	287	Right-handed alpha
Helix 14	AB5	C	308	312	Right-handed 310
Helix 15	AB6	C	334	338	Right-handed alpha
Helix 16	AB7	A	181	185	Right-handed 310
Helix 17	AB8	A	189	213	Right-handed alpha
Helix 18	AB9	A	256	263	Right-handed alpha
Helix 19	AC1	A	268	273	Right-handed 310
Helix 20	AC2	A	280	287	Right-handed alpha
Helix 21	AC3	A	334	339	Right-handed alpha
Helix 22	AC4	A	374	376	Right-handed 310

There are 11 sheets in PDB entry 6TSW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	128	first strand
Strand 2	B	339	343	parallel
Strand 3	B	363	372	anti-parallel
Strand 4	B	170	174	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	128	first strand
Strand 2	B	339	343	parallel
Strand 3	B	363	372	anti-parallel
Strand 4	B	348	350	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	139	first strand
Strand 2	B	162	167	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	229	first strand
Strand 2	B	239	242	parallel
Strand 3	B	378	382	parallel
Strand 4	B	331	333	anti-parallel
Strand 5	B	274	277	anti-parallel
Strand 6	B	314	316	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	128	first strand
Strand 2	C	339	343	parallel
Strand 3	C	364	372	anti-parallel
Strand 4	C	171	174	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	139	first strand
Strand 2	C	162	167	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	242	first strand
Strand 2	C	378	382	parallel
Strand 3	C	330	333	anti-parallel
Strand 4	C	274	277	anti-parallel
Strand 5	C	314	316	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	128	first strand
Strand 2	A	340	343	parallel
Strand 3	A	362	369	anti-parallel
Strand 4	A	170	174	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	128	first strand
Strand 2	A	340	343	parallel
Strand 3	A	362	369	anti-parallel
Strand 4	A	348	351	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	139	first strand
Strand 2	A	162	167	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	239	242	parallel
Strand 3	A	378	382	parallel
Strand 4	A	328	333	anti-parallel
Strand 5	A	274	278	anti-parallel
Strand 6	A	314	317	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TSW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TSW