Analysis of interatomic Contacts of Structural Units in PDB entry:
6TU9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TU9 entry

There are 2 chains in PDB entry 6TU9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 460TRP 749
B
 ALA 465GLU 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6TU9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
469 471Right-handed 310
Helix 2
AA2
A
513 528Right-handed alpha
Helix 3
AA3
A
559 567Right-handed alpha
Helix 4
AA4
A
588 609Right-handed alpha
Helix 5
AA5
A
617 619Right-handed 310
Helix 6
AA6
A
625 627Right-handed 310
Helix 7
AA7
A
635 641Right-handed alpha
Helix 8
AA8
A
642 645Right-handed 310
Helix 9
AA9
A
655 659Right-handed 310
Helix 10
AB1
A
660 667Right-handed alpha
Helix 11
AB2
A
670 687Right-handed alpha
Helix 12
AB3
A
697 707Right-handed alpha
Helix 13
AB4
A
718 729Right-handed alpha
Helix 14
AB5
A
732 736Right-handed 310
Helix 15
AB6
A
738 749Right-handed alpha
Helix 16
AB7
B
469 471Right-handed 310
Helix 17
AB8
B
513 528Right-handed alpha
Helix 18
AB9
B
559 567Right-handed alpha
Helix 19
AC1
B
588 609Right-handed alpha
Helix 20
AC2
B
617 619Right-handed 310
Helix 21
AC3
B
625 627Right-handed 310
Helix 22
AC4
B
641 645Right-handed 310
Helix 23
AC5
B
655 659Right-handed 310
Helix 24
AC6
B
660 667Right-handed alpha
Helix 25
AC7
B
670 687Right-handed alpha
Helix 26
AC8
B
697 707Right-handed alpha
Helix 27
AC9
B
718 729Right-handed alpha
Helix 28
AD1
B
732 736Right-handed 310
Helix 29
AD2
B
738 750Right-handed alpha
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There are 5 sheets in PDB entry 6TU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 481first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
501 507anti-parallel
Strand 4
A
549 553anti-parallel
Strand 5
A
538 542anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 623first strand
Strand 2
A
629 631anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 481first strand
Strand 2
B
485 492anti-parallel
Strand 3
B
501 508anti-parallel
Strand 4
B
549 553anti-parallel
Strand 5
B
538 542anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 623first strand
Strand 2
B
629 631anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
646 647first strand
Strand 2
B
653 654anti-parallel
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