Analysis of interatomic Contacts of Structural Units in PDB entry:
6TUG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TUG entry

There are 2 chains in PDB entry 6TUG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN -1	LEU 430
B	ALA 0	SER 209

There are176 helices in PDB entry 6TUG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	30	Right-handed alpha
Helix 2	AA2	A	40	45	Right-handed alpha
Helix 3	AA3	A	51	55	Right-handed 310
Helix 4	AA4	A	56	65	Right-handed alpha
Helix 5	AA5	A	83	101	Right-handed alpha
Helix 6	AA6	A	114	128	Right-handed alpha
Helix 7	AA7	A	155	169	Right-handed alpha
Helix 8	AA8	A	179	197	Right-handed alpha
Helix 9	AA9	A	199	210	Right-handed alpha
Helix 10	AB1	A	215	233	Right-handed alpha
Helix 11	AB2	A	236	243	Right-handed alpha
Helix 12	AB3	A	246	266	Right-handed alpha
Helix 13	AB4	A	267	291	Right-handed alpha
Helix 14	AB5	A	309	322	Right-handed alpha
Helix 15	AB6	A	342	353	Right-handed alpha
Helix 16	AB7	A	356	368	Right-handed alpha
Helix 17	AB8	A	368	378	Right-handed alpha
Helix 18	AB9	A	385	387	Right-handed 310
Helix 19	AC1	A	388	408	Right-handed alpha
Helix 20	AC2	A	412	416	Right-handed 310
Helix 21	AC3	A	417	430	Right-handed alpha
Helix 22	AC4	B	20	30	Right-handed alpha
Helix 23	AC5	B	40	45	Right-handed alpha
Helix 24	AC6	B	51	55	Right-handed 310
Helix 25	AC7	B	56	63	Right-handed alpha
Helix 26	AC8	B	82	101	Right-handed alpha
Helix 27	AC9	B	114	128	Right-handed alpha
Helix 28	AD1	B	152	154	Right-handed 310
Helix 29	AD2	B	155	168	Right-handed alpha
Helix 30	AD3	B	179	197	Right-handed alpha
Helix 31	AD4	B	199	210	Right-handed alpha
Helix 32	AD5	B	215	233	Right-handed alpha
Helix 33	AD6	B	236	243	Right-handed alpha
Helix 34	AD7	B	246	265	Right-handed alpha
Helix 35	AD8	B	267	291	Right-handed alpha
Helix 36	AD9	B	309	320	Right-handed alpha
Helix 37	AE1	B	341	353	Right-handed alpha
Helix 38	AE2	B	356	367	Right-handed alpha
Helix 39	AE3	B	368	377	Right-handed alpha
Helix 40	AE4	B	385	387	Right-handed 310
Helix 41	AE5	B	388	408	Right-handed alpha
Helix 42	AE6	B	412	416	Right-handed 310
Helix 43	AE7	B	417	430	Right-handed alpha
Helix 44	AE8	C	20	30	Right-handed alpha
Helix 45	AE9	C	40	45	Right-handed alpha
Helix 46	AF1	C	51	55	Right-handed 310
Helix 47	AF2	C	56	65	Right-handed alpha
Helix 48	AF3	C	83	101	Right-handed alpha
Helix 49	AF4	C	114	128	Right-handed alpha
Helix 50	AF5	C	152	154	Right-handed 310
Helix 51	AF6	C	155	168	Right-handed alpha
Helix 52	AF7	C	179	197	Right-handed alpha
Helix 53	AF8	C	199	210	Right-handed alpha
Helix 54	AF9	C	215	233	Right-handed alpha
Helix 55	AG1	C	236	243	Right-handed alpha
Helix 56	AG2	C	246	266	Right-handed alpha
Helix 57	AG3	C	267	291	Right-handed alpha
Helix 58	AG4	C	310	322	Right-handed alpha
Helix 59	AG5	C	342	353	Right-handed alpha
Helix 60	AG6	C	356	368	Right-handed alpha
Helix 61	AG7	C	368	378	Right-handed alpha
Helix 62	AG8	C	385	387	Right-handed 310
Helix 63	AG9	C	388	408	Right-handed alpha
Helix 64	AH1	C	412	416	Right-handed 310
Helix 65	AH2	C	417	430	Right-handed alpha
Helix 66	AH3	D	20	30	Right-handed alpha
Helix 67	AH4	D	40	45	Right-handed alpha
Helix 68	AH5	D	51	55	Right-handed 310
Helix 69	AH6	D	56	64	Right-handed alpha
Helix 70	AH7	D	83	101	Right-handed alpha
Helix 71	AH8	D	114	128	Right-handed alpha
Helix 72	AH9	D	152	154	Right-handed 310
Helix 73	AI1	D	155	169	Right-handed alpha
Helix 74	AI2	D	180	197	Right-handed alpha
Helix 75	AI3	D	199	210	Right-handed alpha
Helix 76	AI4	D	215	233	Right-handed alpha
Helix 77	AI5	D	236	243	Right-handed alpha
Helix 78	AI6	D	246	265	Right-handed alpha
Helix 79	AI7	D	267	291	Right-handed alpha
Helix 80	AI8	D	309	321	Right-handed alpha
Helix 81	AI9	D	341	353	Right-handed alpha
Helix 82	AJ1	D	356	367	Right-handed alpha
Helix 83	AJ2	D	368	377	Right-handed alpha
Helix 84	AJ3	D	385	387	Right-handed 310
Helix 85	AJ4	D	388	408	Right-handed alpha
Helix 86	AJ5	D	412	416	Right-handed 310
Helix 87	AJ6	D	417	430	Right-handed alpha
Helix 88	AJ7	E	20	30	Right-handed alpha
Helix 89	AJ8	E	40	45	Right-handed alpha
Helix 90	AJ9	E	51	55	Right-handed 310
Helix 91	AK1	E	56	65	Right-handed alpha
Helix 92	AK2	E	83	101	Right-handed alpha
Helix 93	AK3	E	114	128	Right-handed alpha
Helix 94	AK4	E	155	169	Right-handed alpha
Helix 95	AK5	E	179	197	Right-handed alpha
Helix 96	AK6	E	199	210	Right-handed alpha
Helix 97	AK7	E	215	233	Right-handed alpha
Helix 98	AK8	E	236	243	Right-handed alpha
Helix 99	AK9	E	246	266	Right-handed alpha
Helix 100	AL1	E	267	291	Right-handed alpha
Helix 101	AL2	E	306	308	Right-handed 310
Helix 102	AL3	E	309	322	Right-handed alpha
Helix 103	AL4	E	342	353	Right-handed alpha
Helix 104	AL5	E	356	368	Right-handed alpha
Helix 105	AL6	E	368	378	Right-handed alpha
Helix 106	AL7	E	385	387	Right-handed 310
Helix 107	AL8	E	388	408	Right-handed alpha
Helix 108	AL9	E	412	416	Right-handed 310
Helix 109	AM1	E	417	430	Right-handed alpha
Helix 110	AM2	F	20	30	Right-handed alpha
Helix 111	AM3	F	40	45	Right-handed alpha
Helix 112	AM4	F	51	55	Right-handed 310
Helix 113	AM5	F	56	65	Right-handed alpha
Helix 114	AM6	F	82	101	Right-handed alpha
Helix 115	AM7	F	114	128	Right-handed alpha
Helix 116	AM8	F	152	154	Right-handed 310
Helix 117	AM9	F	155	168	Right-handed alpha
Helix 118	AN1	F	179	197	Right-handed alpha
Helix 119	AN2	F	199	210	Right-handed alpha
Helix 120	AN3	F	215	233	Right-handed alpha
Helix 121	AN4	F	236	243	Right-handed alpha
Helix 122	AN5	F	246	265	Right-handed alpha
Helix 123	AN6	F	267	291	Right-handed alpha
Helix 124	AN7	F	309	322	Right-handed alpha
Helix 125	AN8	F	341	353	Right-handed alpha
Helix 126	AN9	F	356	367	Right-handed alpha
Helix 127	AO1	F	368	377	Right-handed alpha
Helix 128	AO2	F	385	387	Right-handed 310
Helix 129	AO3	F	388	408	Right-handed alpha
Helix 130	AO4	F	412	416	Right-handed 310
Helix 131	AO5	F	417	430	Right-handed alpha
Helix 132	AO6	G	20	30	Right-handed alpha
Helix 133	AO7	G	40	45	Right-handed alpha
Helix 134	AO8	G	51	55	Right-handed 310
Helix 135	AO9	G	56	65	Right-handed alpha
Helix 136	AP1	G	82	85	Right-handed 310
Helix 137	AP2	G	86	101	Right-handed alpha
Helix 138	AP3	G	114	128	Right-handed alpha
Helix 139	AP4	G	152	154	Right-handed 310
Helix 140	AP5	G	155	169	Right-handed alpha
Helix 141	AP6	G	179	197	Right-handed alpha
Helix 142	AP7	G	199	210	Right-handed alpha
Helix 143	AP8	G	215	233	Right-handed alpha
Helix 144	AP9	G	236	243	Right-handed alpha
Helix 145	AQ1	G	246	266	Right-handed alpha
Helix 146	AQ2	G	267	291	Right-handed alpha
Helix 147	AQ3	G	309	322	Right-handed alpha
Helix 148	AQ4	G	342	353	Right-handed alpha
Helix 149	AQ5	G	356	367	Right-handed alpha
Helix 150	AQ6	G	368	378	Right-handed alpha
Helix 151	AQ7	G	385	387	Right-handed 310
Helix 152	AQ8	G	388	408	Right-handed alpha
Helix 153	AQ9	G	412	416	Right-handed 310
Helix 154	AR1	G	417	430	Right-handed alpha
Helix 155	AR2	H	20	30	Right-handed alpha
Helix 156	AR3	H	40	45	Right-handed alpha
Helix 157	AR4	H	51	55	Right-handed 310
Helix 158	AR5	H	56	65	Right-handed alpha
Helix 159	AR6	H	83	101	Right-handed alpha
Helix 160	AR7	H	114	128	Right-handed alpha
Helix 161	AR8	H	152	154	Right-handed 310
Helix 162	AR9	H	155	169	Right-handed alpha
Helix 163	AS1	H	180	197	Right-handed alpha
Helix 164	AS2	H	199	210	Right-handed alpha
Helix 165	AS3	H	215	233	Right-handed alpha
Helix 166	AS4	H	236	243	Right-handed alpha
Helix 167	AS5	H	246	266	Right-handed alpha
Helix 168	AS6	H	267	291	Right-handed alpha
Helix 169	AS7	H	309	322	Right-handed alpha
Helix 170	AS8	H	341	353	Right-handed alpha
Helix 171	AS9	H	356	368	Right-handed alpha
Helix 172	AT1	H	368	378	Right-handed alpha
Helix 173	AT2	H	385	387	Right-handed 310
Helix 174	AT3	H	388	408	Right-handed alpha
Helix 175	AT4	H	412	416	Right-handed 310
Helix 176	AT5	H	417	430	Right-handed alpha

There are 22 sheets in PDB entry 6TUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	75	first strand
Strand 2	A	33	39	parallel
Strand 3	A	2	7	parallel
Strand 4	A	105	109	parallel
Strand 5	A	132	137	parallel
Strand 6	A	174	176	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	A	18	19	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	296	first strand
Strand 2	A	303	304	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	75	first strand
Strand 2	B	33	39	parallel
Strand 3	B	2	7	parallel
Strand 4	B	105	109	parallel
Strand 5	B	132	137	parallel
Strand 6	B	174	176	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	15	first strand
Strand 2	B	18	19	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	296	first strand
Strand 2	B	303	304	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	75	first strand
Strand 2	C	33	39	parallel
Strand 3	C	2	7	parallel
Strand 4	C	105	109	parallel
Strand 5	C	132	137	parallel
Strand 6	C	174	176	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	15	first strand
Strand 2	C	18	19	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	297	first strand
Strand 2	C	302	304	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	75	first strand
Strand 2	D	33	39	parallel
Strand 3	D	2	7	parallel
Strand 4	D	105	109	parallel
Strand 5	D	132	137	parallel
Strand 6	D	174	176	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	18	19	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	75	first strand
Strand 2	E	33	39	parallel
Strand 3	E	2	7	parallel
Strand 4	E	105	109	parallel
Strand 5	E	132	137	parallel
Strand 6	E	174	176	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	15	first strand
Strand 2	E	18	19	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	295	297	first strand
Strand 2	E	302	304	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	75	first strand
Strand 2	F	33	39	parallel
Strand 3	F	2	7	parallel
Strand 4	F	105	109	parallel
Strand 5	F	132	137	parallel
Strand 6	F	174	176	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	15	first strand
Strand 2	F	18	19	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	295	297	first strand
Strand 2	F	302	304	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	75	first strand
Strand 2	G	33	39	parallel
Strand 3	G	2	7	parallel
Strand 4	G	105	109	parallel
Strand 5	G	132	137	parallel
Strand 6	G	174	176	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	14	15	first strand
Strand 2	G	18	19	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	295	297	first strand
Strand 2	G	302	304	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	75	first strand
Strand 2	H	33	39	parallel
Strand 3	H	2	7	parallel
Strand 4	H	105	109	parallel
Strand 5	H	132	137	parallel
Strand 6	H	174	176	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	15	first strand
Strand 2	H	18	19	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TUG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TUG