Analysis of interatomic Contacts of Structural Units in PDB entry:
6TUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TUH entry

There are 4 chains in PDB entry 6TUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 168
B
 ALA 2GLU 169
C
 ALA 2GLN 166
D
 ALA 2GLN 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6TUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 61Right-handed 310
Helix 2
AA2
A
74 78Right-handed 310
Helix 3
AA3
A
92 96Right-handed 310
Helix 4
AA4
A
117 132Right-handed alpha
Helix 5
AA5
B
59 61Right-handed 310
Helix 6
AA6
B
74 78Right-handed 310
Helix 7
AA7
B
92 97Right-handed alpha
Helix 8
AA8
B
117 132Right-handed alpha
Helix 9
AA9
C
59 61Right-handed 310
Helix 10
AB1
C
74 78Right-handed 310
Helix 11
AB2
C
92 96Right-handed 310
Helix 12
AB3
C
117 132Right-handed alpha
Helix 13
AB4
D
59 61Right-handed 310
Helix 14
AB5
D
74 78Right-handed 310
Helix 15
AB6
D
92 96Right-handed 310
Helix 16
AB7
D
117 133Right-handed alpha
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There are 10 sheets in PDB entry 6TUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 57first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
25 32anti-parallel
Strand 4
A
6 13anti-parallel
Strand 5
A
110 115anti-parallel
Strand 6
A
100 105anti-parallel
Strand 7
A
63 66anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
166 167anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 152anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 57first strand
Strand 2
B
36 43anti-parallel
Strand 3
B
25 32anti-parallel
Strand 4
B
6 13anti-parallel
Strand 5
B
109 115anti-parallel
Strand 6
B
100 106anti-parallel
Strand 7
B
63 66anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 142first strand
Strand 2
B
166 167anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
151 152anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 57first strand
Strand 2
C
36 43anti-parallel
Strand 3
C
25 32anti-parallel
Strand 4
C
6 13anti-parallel
Strand 5
C
110 115anti-parallel
Strand 6
C
100 105anti-parallel
Strand 7
C
63 66anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 148first strand
Strand 2
C
151 152anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 57first strand
Strand 2
D
36 43anti-parallel
Strand 3
D
25 32anti-parallel
Strand 4
D
6 13anti-parallel
Strand 5
D
110 115anti-parallel
Strand 6
D
100 105anti-parallel
Strand 7
D
63 66anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 148first strand
Strand 2
D
151 152anti-parallel
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