Analysis of interatomic Contacts of Structural Units in PDB entry:
6TUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TUX entry

There are 6 chains in PDB entry 6TUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 986
B
 MET 1ASP 985
C
 G 3 T 10
D
 A 2 C 9
E
 A 5 C 11
F
 G 1 T 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6TUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
18 23Right-handed 310
Helix 3
AA3
A
31 38Right-handed alpha
Helix 4
AA4
A
52 68Right-handed alpha
Helix 5
AA5
A
81 91Right-handed alpha
Helix 6
AA6
A
757 780Right-handed alpha
Helix 7
AA7
A
789 800Right-handed alpha
Helix 8
AA8
A
810 817Right-handed 310
Helix 9
AA9
A
837 845Right-handed alpha
Helix 10
AB1
A
847 858Right-handed alpha
Helix 11
AB2
A
870 881Right-handed alpha
Helix 12
AB3
A
886 900Right-handed alpha
Helix 13
AB4
A
912 919Right-handed alpha
Helix 14
AB5
A
929 938Right-handed alpha
Helix 15
AB6
A
954 966Right-handed alpha
Helix 16
AB7
A
969 984Right-handed alpha
Helix 17
AB8
B
5 11Right-handed alpha
Helix 18
AB9
B
18 23Right-handed 310
Helix 19
AC1
B
31 39Right-handed alpha
Helix 20
AC2
B
52 68Right-handed alpha
Helix 21
AC3
B
81 96Right-handed alpha
Helix 22
AC4
B
754 780Right-handed alpha
Helix 23
AC5
B
789 800Right-handed alpha
Helix 24
AC6
B
811 816Right-handed alpha
Helix 25
AC7
B
837 845Right-handed alpha
Helix 26
AC8
B
847 859Right-handed alpha
Helix 27
AC9
B
870 881Right-handed alpha
Helix 28
AD1
B
886 900Right-handed alpha
Helix 29
AD2
B
912 919Right-handed alpha
Helix 30
AD3
B
929 938Right-handed alpha
Helix 31
AD4
B
954 967Right-handed alpha
Helix 32
AD5
B
969 977Right-handed alpha
Helix 33
AD6
B
977 983Right-handed alpha
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There are 4 sheets in PDB entry 6TUX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
832 836anti-parallel
Strand 3
A
820 823anti-parallel
Strand 4
A
806 807parallel
Strand 5
A
26 30parallel
Strand 6
A
71 76parallel
Strand 7
A
783 785parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
859 860first strand
Strand 2
A
863 864anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 17first strand
Strand 2
B
832 836anti-parallel
Strand 3
B
820 823anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
783 785first strand
Strand 2
B
71 76parallel
Strand 3
B
26 30parallel
Strand 4
B
805 807parallel
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