Analysis of interatomic Contacts of Structural Units in PDB entry:
6TV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TV1 entry

There is 1 chain in PDB entry 6TV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1247LYS 1479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6TV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1255 1263Right-handed alpha
Helix 2
AA2
A
1264 1271Right-handed alpha
Helix 3
AA3
A
1300 1312Right-handed alpha
Helix 4
AA4
A
1314 1321Right-handed alpha
Helix 5
AA5
A
1333 1340Right-handed 310
Helix 6
AA6
A
1346 1368Right-handed alpha
Helix 7
AA7
A
1380 1389Right-handed alpha
Helix 8
AA8
A
1391 1402Right-handed alpha
Helix 9
AA9
A
1403 1405Right-handed 310
Helix 10
AB1
A
1415 1419Right-handed alpha
Helix 11
AB2
A
1423 1433Right-handed alpha
Helix 12
AB3
A
1441 1445Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6TV1.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1285 1289first strand
Strand 2
A
1273 1279anti-parallel
Strand 3
A
1471 1477anti-parallel
Strand 4
A
1463 1468anti-parallel
Strand 5
A
1436 1439anti-parallel
Strand 6
A
1294 1298parallel
Strand 7
A
1407 1414parallel
Strand 8
A
1373 1379parallel
Strand 9
A
1322 1328parallel
Strand 10
A
1342 1344parallel
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