Analysis of interatomic Contacts of Structural Units in PDB entry:
6TVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TVO entry

There are 2 chains in PDB entry 6TVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 6PRO 180
A
 LEU 8SER 1031
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6TVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
22 33Right-handed alpha
Helix 2
AA2
B
77 81Right-handed 310
Helix 3
AA3
B
94 100Right-handed alpha
Helix 4
AA4
B
100 112Right-handed alpha
Helix 5
AA5
B
132 136Right-handed 310
Helix 6
AA6
B
158 170Right-handed alpha
Helix 7
AA7
A
9 16Right-handed alpha
Helix 8
AA8
A
24 38Right-handed alpha
Helix 9
AA9
A
40 56Right-handed alpha
Helix 10
AB1
A
58 61Right-handed 310
Helix 11
AB2
A
62 70Right-handed alpha
Helix 12
AB3
A
72 90Right-handed alpha
Helix 13
AB4
A
91 94Right-handed 310
Helix 14
AB5
A
95 116Right-handed alpha
Helix 15
AB6
A
117 120Right-handed 310
Helix 16
AB7
A
123 146Right-handed alpha
Helix 17
AB8
A
148 160Right-handed alpha
Helix 18
AB9
A
160 180Right-handed alpha
Helix 19
AC1
A
187 201Right-handed alpha
Helix 20
AC2
A
201 216Right-handed alpha
Helix 21
AC3
A
218 236Right-handed alpha
Helix 22
AC4
A
238 243Right-handed alpha
Helix 23
AC5
A
245 254Right-handed alpha
Helix 24
AC6
A
257 259Right-handed 310
Helix 25
AC7
A
260 274Right-handed alpha
Helix 26
AC8
A
279 298Right-handed alpha
Helix 27
AC9
A
303 311Right-handed alpha
Helix 28
AD1
A
312 339Right-handed alpha
Helix 29
AD2
A
340 342Right-handed 310
Helix 30
AD3
A
343 359Right-handed alpha
Helix 31
AD4
A
362 384Right-handed alpha
Helix 32
AD5
A
403 423Right-handed alpha
Helix 33
AD6
A
448 468Right-handed alpha
Helix 34
AD7
A
468 485Right-handed alpha
Helix 35
AD8
A
490 504Right-handed alpha
Helix 36
AD9
A
509 531Right-handed alpha
Helix 37
AE1
A
533 550Right-handed alpha
Helix 38
AE2
A
551 558Right-handed alpha
Helix 39
AE3
A
558 573Right-handed alpha
Helix 40
AE4
A
579 595Right-handed alpha
Helix 41
AE5
A
596 601Right-handed alpha
Helix 42
AE6
A
609 617Right-handed alpha
Helix 43
AE7
A
617 622Right-handed alpha
Helix 44
AE8
A
626 644Right-handed alpha
Helix 45
AE9
A
646 658Right-handed alpha
Helix 46
AF1
A
658 675Right-handed alpha
Helix 47
AF2
A
676 680Right-handed 310
Helix 48
AF3
A
681 703Right-handed alpha
Helix 49
AF4
A
706 736Right-handed alpha
Helix 50
AF5
A
737 741Right-handed 310
Helix 51
AF6
A
742 765Right-handed alpha
Helix 52
AF7
A
768 776Right-handed alpha
Helix 53
AF8
A
776 784Right-handed alpha
Helix 54
AF9
A
784 791Right-handed alpha
Helix 55
AG1
A
792 797Right-handed 310
Helix 56
AG2
A
798 812Right-handed alpha
Helix 57
AG3
A
813 817Right-handed 310
Helix 58
AG4
A
818 832Right-handed alpha
Helix 59
AG5
A
841 859Right-handed alpha
Helix 60
AG6
A
859 865Right-handed alpha
Helix 61
AG7
A
867 883Right-handed alpha
Helix 62
AG8
A
886 907Right-handed alpha
Helix 63
AG9
A
907 931Right-handed alpha
Helix 64
AH1
A
935 937Right-handed 310
Helix 65
AH2
A
938 955Right-handed alpha
Helix 66
AH3
A
969 986Right-handed alpha
Helix 67
AH4
A
990 1004Right-handed alpha
Helix 68
AH5
A
1007 1022Right-handed alpha
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There are 2 sheets in PDB entry 6TVO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 54first strand
Strand 2
B
57 66anti-parallel
Strand 3
B
9 17parallel
Strand 4
B
85 91parallel
Strand 5
B
117 122parallel
Strand 6
B
145 147parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 434first strand
Strand 2
A
440 445anti-parallel
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