Analysis of interatomic Contacts of Structural Units in PDB entry:
6TVR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TVR entry

There are 12 chains in PDB entry 6TVR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	LEU 321
B	GLY 1	ASN 172
C	ASP 1	GLU 320
D	GLY 1	ASN 172
E	ASP 1	GLU 320
F	GLY 1	ASN 172
G	PRO 1	GLU 319
H	GLY 1	ASN 172
I	ASP 1	GLU 320
J	GLY 1	ASN 172
K	ASP 1	GLU 320
L	GLY 1	ASN 172

There are 54 helices in PDB entry 6TVR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	59	64	Right-handed alpha
Helix 2	AA2	A	65	72	Right-handed 310
Helix 3	AA3	A	96	106	Right-handed alpha
Helix 4	AA4	A	182	190	Right-handed alpha
Helix 5	AA5	B	37	56	Right-handed alpha
Helix 6	AA6	B	74	127	Right-handed alpha
Helix 7	AA7	B	145	154	Right-handed alpha
Helix 8	AA8	B	158	161	Right-handed 310
Helix 9	AA9	B	162	172	Right-handed alpha
Helix 10	AB1	C	59	64	Right-handed alpha
Helix 11	AB2	C	65	72	Right-handed 310
Helix 12	AB3	C	96	106	Right-handed alpha
Helix 13	AB4	C	182	190	Right-handed alpha
Helix 14	AB5	D	37	56	Right-handed alpha
Helix 15	AB6	D	74	127	Right-handed alpha
Helix 16	AB7	D	145	154	Right-handed alpha
Helix 17	AB8	D	158	161	Right-handed 310
Helix 18	AB9	D	162	172	Right-handed alpha
Helix 19	AC1	E	59	64	Right-handed alpha
Helix 20	AC2	E	65	72	Right-handed 310
Helix 21	AC3	E	96	106	Right-handed alpha
Helix 22	AC4	E	182	190	Right-handed alpha
Helix 23	AC5	F	37	56	Right-handed alpha
Helix 24	AC6	F	74	127	Right-handed alpha
Helix 25	AC7	F	145	154	Right-handed alpha
Helix 26	AC8	F	158	161	Right-handed 310
Helix 27	AC9	F	162	172	Right-handed alpha
Helix 28	AD1	G	58	63	Right-handed alpha
Helix 29	AD2	G	64	71	Right-handed 310
Helix 30	AD3	G	95	105	Right-handed alpha
Helix 31	AD4	G	181	189	Right-handed alpha
Helix 32	AD5	H	37	56	Right-handed alpha
Helix 33	AD6	H	74	127	Right-handed alpha
Helix 34	AD7	H	145	154	Right-handed alpha
Helix 35	AD8	H	158	161	Right-handed 310
Helix 36	AD9	H	162	172	Right-handed alpha
Helix 37	AE1	I	59	64	Right-handed alpha
Helix 38	AE2	I	65	72	Right-handed 310
Helix 39	AE3	I	96	106	Right-handed alpha
Helix 40	AE4	I	182	190	Right-handed alpha
Helix 41	AE5	J	37	56	Right-handed alpha
Helix 42	AE6	J	74	127	Right-handed alpha
Helix 43	AE7	J	145	154	Right-handed alpha
Helix 44	AE8	J	158	161	Right-handed 310
Helix 45	AE9	J	162	172	Right-handed alpha
Helix 46	AF1	K	59	64	Right-handed alpha
Helix 47	AF2	K	65	72	Right-handed 310
Helix 48	AF3	K	96	106	Right-handed alpha
Helix 49	AF4	K	182	190	Right-handed alpha
Helix 50	AF5	L	37	56	Right-handed alpha
Helix 51	AF6	L	74	127	Right-handed alpha
Helix 52	AF7	L	145	154	Right-handed alpha
Helix 53	AF8	L	158	161	Right-handed 310
Helix 54	AF9	L	162	172	Right-handed alpha

There are 67 sheets in PDB entry 6TVR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	36	first strand
Strand 2	B	22	28	anti-parallel
Strand 3	A	3	9	anti-parallel
Strand 4	B	137	140	anti-parallel
Strand 5	B	130	132	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	26	28	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	33	first strand
Strand 2	A	310	312	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	289	290	parallel
Strand 3	A	302	303	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	268	269	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	52	first strand
Strand 2	A	78	81	parallel
Strand 3	A	260	263	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	75	first strand
Strand 2	A	109	114	anti-parallel
Strand 3	A	251	255	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	127	first strand
Strand 2	A	144	149	anti-parallel
Strand 3	A	246	249	anti-parallel
Strand 4	A	171	179	anti-parallel
Strand 5	A	224	232	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	134	first strand
Strand 2	A	137	139	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	197	200	anti-parallel
Strand 4	A	205	208	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	281	282	first strand
Strand 2	A	276	278	anti-parallel
Strand 3	A	297	298	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	36	first strand
Strand 2	D	22	28	anti-parallel
Strand 3	C	3	9	anti-parallel
Strand 4	D	137	140	anti-parallel
Strand 5	D	130	132	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	18	first strand
Strand 2	C	26	28	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	33	first strand
Strand 2	C	310	312	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	C	289	290	parallel
Strand 3	C	302	303	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	268	269	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	52	first strand
Strand 2	C	78	81	parallel
Strand 3	C	260	263	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	109	114	anti-parallel
Strand 3	C	251	255	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	124	first strand
Strand 2	C	148	149	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	134	first strand
Strand 2	C	137	139	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	146	first strand
Strand 2	C	246	249	anti-parallel
Strand 3	C	171	179	anti-parallel
Strand 4	C	224	232	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	164	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	197	200	anti-parallel
Strand 4	C	205	208	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	282	first strand
Strand 2	C	276	278	anti-parallel
Strand 3	C	297	298	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	36	first strand
Strand 2	F	22	28	anti-parallel
Strand 3	E	3	9	anti-parallel
Strand 4	F	137	140	anti-parallel
Strand 5	F	130	132	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	18	first strand
Strand 2	E	26	28	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	31	33	first strand
Strand 2	E	310	312	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	36	first strand
Strand 2	E	289	290	parallel
Strand 3	E	302	303	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	44	first strand
Strand 2	E	268	269	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	52	first strand
Strand 2	E	78	81	parallel
Strand 3	E	260	263	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	75	first strand
Strand 2	E	109	114	anti-parallel
Strand 3	E	251	255	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	127	first strand
Strand 2	E	144	149	anti-parallel
Strand 3	E	246	249	anti-parallel
Strand 4	E	171	179	anti-parallel
Strand 5	E	224	232	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	134	first strand
Strand 2	E	137	139	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	164	first strand
Strand 2	E	237	242	anti-parallel
Strand 3	E	197	200	anti-parallel
Strand 4	E	205	208	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	281	282	first strand
Strand 2	E	276	278	anti-parallel
Strand 3	E	297	298	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	31	36	first strand
Strand 2	H	22	28	anti-parallel
Strand 3	G	2	8	anti-parallel
Strand 4	H	137	140	anti-parallel
Strand 5	H	130	132	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	17	first strand
Strand 2	G	25	27	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	32	first strand
Strand 2	G	309	311	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	35	first strand
Strand 2	G	288	289	parallel
Strand 3	G	301	302	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	G	267	268	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	49	51	first strand
Strand 2	G	77	80	parallel
Strand 3	G	259	262	parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	74	first strand
Strand 2	G	108	113	anti-parallel
Strand 3	G	250	254	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	122	126	first strand
Strand 2	G	143	148	anti-parallel
Strand 3	G	245	248	anti-parallel
Strand 4	G	170	178	anti-parallel
Strand 5	G	223	231	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	128	133	first strand
Strand 2	G	136	138	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	163	first strand
Strand 2	G	236	241	anti-parallel
Strand 3	G	196	199	anti-parallel
Strand 4	G	204	207	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	280	281	first strand
Strand 2	G	275	277	anti-parallel
Strand 3	G	296	297	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	31	36	first strand
Strand 2	J	22	28	anti-parallel
Strand 3	I	3	9	anti-parallel
Strand 4	J	137	140	anti-parallel
Strand 5	J	130	132	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	16	18	first strand
Strand 2	I	26	28	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	31	33	first strand
Strand 2	I	310	312	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	35	36	first strand
Strand 2	I	289	290	parallel
Strand 3	I	302	303	parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	43	44	first strand
Strand 2	I	268	269	parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	50	52	first strand
Strand 2	I	78	81	parallel
Strand 3	I	260	263	parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	74	75	first strand
Strand 2	I	109	114	anti-parallel
Strand 3	I	251	255	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	123	127	first strand
Strand 2	I	144	149	anti-parallel
Strand 3	I	246	249	anti-parallel
Strand 4	I	171	179	anti-parallel
Strand 5	I	224	232	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	134	first strand
Strand 2	I	137	139	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	159	164	first strand
Strand 2	I	237	242	anti-parallel
Strand 3	I	197	200	anti-parallel
Strand 4	I	205	208	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	281	282	first strand
Strand 2	I	276	278	anti-parallel
Strand 3	I	297	298	anti-parallel

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There are 5 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	31	36	first strand
Strand 2	L	22	28	anti-parallel
Strand 3	K	3	9	anti-parallel
Strand 4	L	137	140	anti-parallel
Strand 5	L	130	132	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	16	18	first strand
Strand 2	K	26	28	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	31	33	first strand
Strand 2	K	310	312	anti-parallel

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There are 3 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	36	first strand
Strand 2	K	289	290	parallel
Strand 3	K	302	303	parallel

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There are 2 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	43	44	first strand
Strand 2	K	268	269	parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	50	52	first strand
Strand 2	K	78	81	parallel
Strand 3	K	260	263	parallel

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There are 3 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	74	75	first strand
Strand 2	K	109	114	anti-parallel
Strand 3	K	251	255	anti-parallel

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There are 5 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	123	127	first strand
Strand 2	K	144	149	anti-parallel
Strand 3	K	246	249	anti-parallel
Strand 4	K	171	179	anti-parallel
Strand 5	K	224	232	anti-parallel

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There are 2 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	129	134	first strand
Strand 2	K	137	139	anti-parallel

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There are 4 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	159	164	first strand
Strand 2	K	237	242	anti-parallel
Strand 3	K	197	200	anti-parallel
Strand 4	K	205	208	anti-parallel

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There are 3 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	281	282	first strand
Strand 2	K	276	278	anti-parallel
Strand 3	K	297	298	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 6TVR

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TVR