Analysis of interatomic Contacts of Structural Units in PDB entry:
6TX3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TX3 entry

There are 2 chains in PDB entry 6TX3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 217TRP 570
A
 HIS 35LEU 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6TX3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
222 233Right-handed alpha
Helix 2
AA2
B
343 350Right-handed alpha
Helix 3
AA3
B
363 376Right-handed alpha
Helix 4
AA4
B
398 403Right-handed alpha
Helix 5
AA5
B
418 420Right-handed 310
Helix 6
AA6
B
421 429Right-handed alpha
Helix 7
AA7
B
453 459Right-handed alpha
Helix 8
AA8
B
460 462Right-handed 310
Helix 9
AA9
B
493 497Right-handed 310
Helix 10
AB1
B
512 515Right-handed 310
Helix 11
AB2
B
550 552Right-handed 310
Helix 12
AB3
A
37 46Right-handed alpha
Helix 13
AB4
A
50 64Right-handed alpha
Helix 14
AB5
A
67 71Right-handed 310
Helix 15
AB6
A
72 77Right-handed alpha
Helix 16
AB7
A
82 88Right-handed alpha
Helix 17
AB8
A
160 174Right-handed alpha
Helix 18
AB9
A
178 200Right-handed alpha
Helix 19
AC1
A
207 215Right-handed alpha
Helix 20
AC2
A
244 257Right-handed alpha
Helix 21
AC3
A
260 268Right-handed alpha
Helix 22
AC4
A
268 284Right-handed alpha
Helix 23
AC5
A
287 301Right-handed alpha
Helix 24
AC6
A
302 304Right-handed 310
Helix 25
AC7
A
305 320Right-handed alpha
Helix 26
AC8
A
322 335Right-handed alpha
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There are 5 sheets in PDB entry 6TX3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 358first strand
Strand 2
B
384 396anti-parallel
Strand 3
B
554 566anti-parallel
Strand 4
B
469 478anti-parallel
Strand 5
B
410 416anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 450first strand
Strand 2
B
545 548anti-parallel
Strand 3
B
501 504anti-parallel
Strand 4
B
482 485parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 510first strand
Strand 2
B
528 530anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
516 518first strand
Strand 2
B
521 523anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
115 120anti-parallel
Strand 3
A
127 132anti-parallel
Strand 4
A
142 147anti-parallel
Strand 5
A
155 156anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il