Analysis of interatomic Contacts of Structural Units in PDB entry:
6TY3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TY3 entry

There are 2 chains in PDB entry 6TY3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 35	GLN 686
B	ARG 35	GLN 686

There are 44 helices in PDB entry 6TY3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	74	Right-handed alpha
Helix 2	AA2	A	103	113	Right-handed alpha
Helix 3	AA3	A	116	120	Right-handed 310
Helix 4	AA4	A	132	137	Right-handed alpha
Helix 5	AA5	A	140	159	Right-handed alpha
Helix 6	AA6	A	164	180	Right-handed alpha
Helix 7	AA7	A	190	200	Right-handed alpha
Helix 8	AA8	A	208	213	Right-handed alpha
Helix 9	AA9	A	216	231	Right-handed alpha
Helix 10	AB1	A	235	251	Right-handed alpha
Helix 11	AB2	A	295	297	Right-handed 310
Helix 12	AB3	A	333	352	Right-handed alpha
Helix 13	AB4	A	461	477	Right-handed alpha
Helix 14	AB5	A	507	514	Right-handed alpha
Helix 15	AB6	A	515	518	Right-handed 310
Helix 16	AB7	A	519	541	Right-handed alpha
Helix 17	AB8	A	590	597	Right-handed alpha
Helix 18	AB9	A	600	617	Right-handed alpha
Helix 19	AC1	A	629	637	Right-handed alpha
Helix 20	AC2	A	648	658	Right-handed alpha
Helix 21	AC3	A	662	666	Right-handed 310
Helix 22	AC4	A	668	686	Right-handed alpha
Helix 23	AC5	B	63	74	Right-handed alpha
Helix 24	AC6	B	103	113	Right-handed alpha
Helix 25	AC7	B	116	120	Right-handed 310
Helix 26	AC8	B	132	137	Right-handed alpha
Helix 27	AC9	B	140	159	Right-handed alpha
Helix 28	AD1	B	164	180	Right-handed alpha
Helix 29	AD2	B	190	200	Right-handed alpha
Helix 30	AD3	B	208	213	Right-handed alpha
Helix 31	AD4	B	216	231	Right-handed alpha
Helix 32	AD5	B	235	251	Right-handed alpha
Helix 33	AD6	B	295	297	Right-handed 310
Helix 34	AD7	B	333	352	Right-handed alpha
Helix 35	AD8	B	461	477	Right-handed alpha
Helix 36	AD9	B	507	514	Right-handed alpha
Helix 37	AE1	B	515	518	Right-handed 310
Helix 38	AE2	B	519	541	Right-handed alpha
Helix 39	AE3	B	590	597	Right-handed alpha
Helix 40	AE4	B	600	617	Right-handed alpha
Helix 41	AE5	B	629	637	Right-handed alpha
Helix 42	AE6	B	648	658	Right-handed alpha
Helix 43	AE7	B	662	666	Right-handed 310
Helix 44	AE8	B	668	686	Right-handed alpha

There are 12 sheets in PDB entry 6TY3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	40	first strand
Strand 2	A	53	57	anti-parallel
Strand 3	A	399	400	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	95	97	first strand
Strand 2	A	83	88	anti-parallel
Strand 3	A	121	126	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	262	first strand
Strand 2	A	268	270	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	306	first strand
Strand 2	A	314	320	anti-parallel
Strand 3	A	328	331	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	430	first strand
Strand 2	A	435	441	anti-parallel
Strand 3	A	449	454	anti-parallel
Strand 4	A	496	500	anti-parallel
Strand 5	A	486	490	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	505	506	first strand
Strand 2	A	553	556	anti-parallel
Strand 3	A	559	561	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	40	first strand
Strand 2	B	53	57	anti-parallel
Strand 3	B	399	400	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	98	first strand
Strand 2	B	83	88	anti-parallel
Strand 3	B	121	126	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	260	262	first strand
Strand 2	B	268	270	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	306	first strand
Strand 2	B	314	320	anti-parallel
Strand 3	B	328	331	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	430	first strand
Strand 2	B	435	441	anti-parallel
Strand 3	B	449	454	anti-parallel
Strand 4	B	496	500	anti-parallel
Strand 5	B	486	490	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	506	first strand
Strand 2	B	553	556	anti-parallel
Strand 3	B	559	561	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TY3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TY3