Analysis of interatomic Contacts of Structural Units in PDB entry:
6TY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TY8 entry

There are 2 chains in PDB entry 6TY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ASN 1224
B
 PHE 2VAL 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 6TY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 9Right-handed 310
Helix 2
AA2
A
10 16Right-handed alpha
Helix 3
AA3
A
19 36Right-handed alpha
Helix 4
AA4
A
36 45Right-handed alpha
Helix 5
AA5
A
72 77Right-handed alpha
Helix 6
AA6
A
82 86Right-handed 310
Helix 7
AA7
A
108 112Right-handed 310
Helix 8
AA8
A
120 135Right-handed alpha
Helix 9
AA9
A
144 161Right-handed alpha
Helix 10
AB1
A
165 176Right-handed alpha
Helix 11
AB2
A
202 219Right-handed alpha
Helix 12
AB3
A
223 238Right-handed alpha
Helix 13
AB4
A
241 250Right-handed alpha
Helix 14
AB5
A
256 263Right-handed alpha
Helix 15
AB6
A
289 294Right-handed alpha
Helix 16
AB7
A
294 307Right-handed alpha
Helix 17
AB8
A
308 322Right-handed alpha
Helix 18
AB9
A
324 338Right-handed alpha
Helix 19
AC1
A
352 358Right-handed alpha
Helix 20
AC2
A
388 398Right-handed alpha
Helix 21
AC3
A
400 410Right-handed alpha
Helix 22
AC4
A
412 424Right-handed alpha
Helix 23
AC5
A
450 460Right-handed alpha
Helix 24
AC6
A
463 472Right-handed alpha
Helix 25
AC7
A
495 500Right-handed alpha
Helix 26
AC8
A
500 508Right-handed alpha
Helix 27
AC9
A
509 513Right-handed 310
Helix 28
AD1
A
531 536Right-handed alpha
Helix 29
AD2
A
550 555Right-handed alpha
Helix 30
AD3
A
556 572Right-handed alpha
Helix 31
AD4
A
603 615Right-handed alpha
Helix 32
AD5
A
641 667Right-handed alpha
Helix 33
AD6
A
689 707Right-handed alpha
Helix 34
AD7
A
735 739Right-handed 310
Helix 35
AD8
A
752 767Right-handed alpha
Helix 36
AD9
A
773 788Right-handed alpha
Helix 37
AE1
A
800 809Right-handed alpha
Helix 38
AE2
A
833 839Right-handed 310
Helix 39
AE3
A
867 871Right-handed 310
Helix 40
AE4
A
872 879Right-handed alpha
Helix 41
AE5
A
880 888Right-handed alpha
Helix 42
AE6
A
893 901Right-handed alpha
Helix 43
AE7
A
901 911Right-handed alpha
Helix 44
AE8
A
918 924Right-handed alpha
Helix 45
AE9
A
932 939Right-handed alpha
Helix 46
AF1
A
942 959Right-handed alpha
Helix 47
AF2
A
970 980Right-handed alpha
Helix 48
AF3
A
995 1007Right-handed alpha
Helix 49
AF4
A
1014 1020Right-handed 310
Helix 50
AF5
A
1035 1040Right-handed alpha
Helix 51
AF6
A
1053 1062Right-handed alpha
Helix 52
AF7
A
1066 1081Right-handed alpha
Helix 53
AF8
A
1090 1103Right-handed alpha
Helix 54
AF9
A
1106 1114Right-handed alpha
Helix 55
AG1
A
1117 1135Right-handed alpha
Helix 56
AG2
A
1154 1160Right-handed 310
Helix 57
AG3
A
1167 1172Right-handed alpha
Helix 58
AG4
A
1174 1189Right-handed alpha
Helix 59
AG5
A
1203 1211Right-handed alpha
Helix 60
AG6
A
1214 1219Right-handed alpha
Helix 61
AG7
B
9 14Right-handed alpha
Helix 62
AG8
B
41 63Right-handed alpha
Helix 63
AG9
B
69 79Right-handed alpha
Helix 64
AH1
B
134 147Right-handed alpha
Helix 65
AH2
B
161 166Right-handed alpha
Helix 66
AH3
B
169 177Right-handed alpha
Helix 67
AH4
B
195 202Right-handed alpha
Helix 68
AH5
B
235 243Right-handed alpha
Helix 69
AH6
B
289 296Right-handed alpha
Helix 70
AH7
B
325 341Right-handed alpha
Helix 71
AH8
B
358 375Right-handed alpha
Helix 72
AH9
B
384 394Right-handed alpha
Helix 73
AI1
B
402 410Right-handed alpha
Helix 74
AI2
B
416 429Right-handed alpha
Helix 75
AI3
B
433 439Right-handed alpha
Helix 76
AI4
B
441 461Right-handed alpha
Helix 77
AI5
B
467 477Right-handed alpha
Helix 78
AI6
B
491 495Right-handed 310
Helix 79
AI7
B
512 520Right-handed alpha
Helix 80
AI8
B
524 538Right-handed alpha
Helix 81
AI9
B
546 557Right-handed alpha
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There are 15 sheets in PDB entry 6TY8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
64 68anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 186first strand
Strand 2
A
191 194anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
278 285anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 384first strand
Strand 2
A
370 374anti-parallel
Strand 3
A
585 591anti-parallel
Strand 4
A
598 602anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 479first strand
Strand 2
A
487 489anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 547first strand
Strand 2
A
681 687anti-parallel
Strand 3
A
672 677anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 579first strand
Strand 2
A
582 583anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 624first strand
Strand 2
A
628 630anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 721first strand
Strand 2
A
726 728anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
813 816first strand
Strand 2
A
825 831anti-parallel
Strand 3
A
791 797anti-parallel
Strand 4
A
992 994parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1030first strand
Strand 2
A
1196 1202anti-parallel
Strand 3
A
1162 1163parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
182 184parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 208first strand
Strand 2
B
226 230parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 299first strand
Strand 2
B
266 271anti-parallel
Strand 3
B
256 261anti-parallel
Strand 4
B
313 317anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 381first strand
Strand 2
B
484 489parallel
Strand 3
B
348 352parallel
Strand 4
B
504 507parallel
Strand 5
B
543 545parallel
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