Analysis of interatomic Contacts of Structural Units in PDB entry:
6TYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TYT entry

There are 3 chains in PDB entry 6TYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6PHE 236
B
 ALA 306MET 311
C
 ARG 182ALA 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 6TYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed 310
Helix 2
AA2
A
28 47Right-handed alpha
Helix 3
AA3
A
86 96Right-handed alpha
Helix 4
AA4
A
105 121Right-handed alpha
Helix 5
AA5
A
145 157Right-handed alpha
Helix 6
AA6
A
197 221Right-handed alpha
Helix 7
AA7
A
226 233Right-handed alpha
Helix 8
AA8
B
307 311Right-handed 310
Helix 9
AA9
C
187 192Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 6TYT.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 83first strand
Strand 2
A
52 58anti-parallel
Strand 3
A
7 14parallel
Strand 4
A
128 134parallel
Strand 5
A
158 164parallel
Strand 6
A
223 225parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il