Analysis of interatomic Contacts of Structural Units in PDB entry:
6TZ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TZ2 entry

There are 5 chains in PDB entry 6TZ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5GLY 1212
B
 MET 1VAL 560
M
 U 1 U 18
N
 U 1 U 36
T
 A 1 A 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 81 helices in PDB entry 6TZ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 10Right-handed 310
Helix 2
AA2
A
11 16Right-handed alpha
Helix 3
AA3
A
19 36Right-handed alpha
Helix 4
AA4
A
36 45Right-handed alpha
Helix 5
AA5
A
72 77Right-handed alpha
Helix 6
AA6
A
82 86Right-handed 310
Helix 7
AA7
A
108 112Right-handed 310
Helix 8
AA8
A
120 135Right-handed alpha
Helix 9
AA9
A
144 161Right-handed alpha
Helix 10
AB1
A
165 175Right-handed alpha
Helix 11
AB2
A
204 219Right-handed alpha
Helix 12
AB3
A
223 238Right-handed alpha
Helix 13
AB4
A
241 249Right-handed alpha
Helix 14
AB5
A
256 264Right-handed alpha
Helix 15
AB6
A
291 294Right-handed 310
Helix 16
AB7
A
295 307Right-handed alpha
Helix 17
AB8
A
308 321Right-handed alpha
Helix 18
AB9
A
324 340Right-handed alpha
Helix 19
AC1
A
348 358Right-handed alpha
Helix 20
AC2
A
388 410Right-handed alpha
Helix 21
AC3
A
412 422Right-handed alpha
Helix 22
AC4
A
431 438Right-handed alpha
Helix 23
AC5
A
439 445Right-handed alpha
Helix 24
AC6
A
448 456Right-handed alpha
Helix 25
AC7
A
457 460Right-handed 310
Helix 26
AC8
A
463 470Right-handed alpha
Helix 27
AC9
A
493 500Right-handed alpha
Helix 28
AD1
A
500 509Right-handed alpha
Helix 29
AD2
A
509 514Right-handed alpha
Helix 30
AD3
A
529 537Right-handed alpha
Helix 31
AD4
A
556 574Right-handed alpha
Helix 32
AD5
A
603 615Right-handed alpha
Helix 33
AD6
A
645 666Right-handed alpha
Helix 34
AD7
A
689 707Right-handed alpha
Helix 35
AD8
A
752 767Right-handed alpha
Helix 36
AD9
A
773 787Right-handed alpha
Helix 37
AE1
A
800 809Right-handed alpha
Helix 38
AE2
A
833 839Right-handed 310
Helix 39
AE3
A
869 879Right-handed alpha
Helix 40
AE4
A
880 887Right-handed alpha
Helix 41
AE5
A
893 901Right-handed alpha
Helix 42
AE6
A
901 912Right-handed alpha
Helix 43
AE7
A
926 938Right-handed alpha
Helix 44
AE8
A
945 959Right-handed alpha
Helix 45
AE9
A
971 985Right-handed alpha
Helix 46
AF1
A
996 1006Right-handed alpha
Helix 47
AF2
A
1016 1020Right-handed 310
Helix 48
AF3
A
1035 1040Right-handed alpha
Helix 49
AF4
A
1053 1062Right-handed alpha
Helix 50
AF5
A
1075 1081Right-handed alpha
Helix 51
AF6
A
1090 1102Right-handed alpha
Helix 52
AF7
A
1103 1105Right-handed 310
Helix 53
AF8
A
1106 1115Right-handed alpha
Helix 54
AF9
A
1117 1133Right-handed alpha
Helix 55
AG1
A
1154 1159Right-handed 310
Helix 56
AG2
A
1173 1189Right-handed alpha
Helix 57
AG3
A
1203 1212Right-handed alpha
Helix 58
AG4
B
10 16Right-handed alpha
Helix 59
AG5
B
41 63Right-handed alpha
Helix 60
AG6
B
69 79Right-handed alpha
Helix 61
AG7
B
132 134Right-handed 310
Helix 62
AG8
B
135 147Right-handed alpha
Helix 63
AG9
B
161 166Right-handed alpha
Helix 64
AH1
B
169 177Right-handed alpha
Helix 65
AH2
B
195 202Right-handed alpha
Helix 66
AH3
B
215 219Right-handed 310
Helix 67
AH4
B
235 243Right-handed alpha
Helix 68
AH5
B
289 296Right-handed alpha
Helix 69
AH6
B
325 341Right-handed alpha
Helix 70
AH7
B
359 375Right-handed alpha
Helix 71
AH8
B
384 394Right-handed alpha
Helix 72
AH9
B
402 409Right-handed alpha
Helix 73
AI1
B
416 428Right-handed alpha
Helix 74
AI2
B
433 438Right-handed alpha
Helix 75
AI3
B
441 457Right-handed alpha
Helix 76
AI4
B
458 460Right-handed 310
Helix 77
AI5
B
467 477Right-handed alpha
Helix 78
AI6
B
491 497Right-handed 310
Helix 79
AI7
B
512 517Right-handed alpha
Helix 80
AI8
B
524 538Right-handed alpha
Helix 81
AI9
B
546 557Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 6TZ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
64 68anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 186first strand
Strand 2
A
191 194anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
278 285anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 384first strand
Strand 2
A
370 374anti-parallel
Strand 3
A
585 591anti-parallel
Strand 4
A
598 602anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 478first strand
Strand 2
A
488 490anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 677first strand
Strand 2
A
681 687anti-parallel
Strand 3
A
541 548anti-parallel
Strand 4
A
711 716anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
630 631anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 722first strand
Strand 2
A
725 727anti-parallel
Strand 3
A
732 733anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
791 792first strand
Strand 2
A
830 831anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
867 868first strand
Strand 2
A
1141 1142anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1026first strand
Strand 2
A
1198 1202anti-parallel
Strand 3
A
1162 1163parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
182 184parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
229 230parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
255 261anti-parallel
Strand 3
B
269 271anti-parallel
Strand 4
B
297 299anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
255 261anti-parallel
Strand 3
B
313 319anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 381first strand
Strand 2
B
484 489parallel
Strand 3
B
347 352parallel
Strand 4
B
503 507parallel
Strand 5
B
543 545parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il