Analysis of interatomic Contacts of Structural Units in PDB entry:
6TZ8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6TZ8 entry

There are 6 chains in PDB entry 6TZ8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 25	CYS 401
B	GLY 2	PHE 175
C	GLY 2	ALA 112
D	SER 24	CYS 401
E	GLY 2	PHE 175
F	GLY 2	ALA 112

There are 59 helices in PDB entry 6TZ8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	63	Right-handed alpha
Helix 2	AA2	A	72	82	Right-handed alpha
Helix 3	AA3	A	87	105	Right-handed alpha
Helix 4	AA4	A	124	136	Right-handed alpha
Helix 5	AA5	A	155	170	Right-handed alpha
Helix 6	AA6	A	183	190	Right-handed alpha
Helix 7	AA7	A	191	200	Right-handed alpha
Helix 8	AA8	A	201	213	Right-handed alpha
Helix 9	AA9	A	238	244	Right-handed alpha
Helix 10	AB1	A	255	263	Right-handed alpha
Helix 11	AB2	A	291	303	Right-handed alpha
Helix 12	AB3	A	340	344	Right-handed 310
Helix 13	AB4	A	373	377	Right-handed 310
Helix 14	AB5	A	378	399	Right-handed alpha
Helix 15	AB6	B	3	16	Right-handed alpha
Helix 16	AB7	B	19	34	Right-handed alpha
Helix 17	AB8	B	42	48	Right-handed alpha
Helix 18	AB9	B	49	54	Right-handed alpha
Helix 19	AC1	B	57	66	Right-handed alpha
Helix 20	AC2	B	75	84	Right-handed alpha
Helix 21	AC3	B	90	103	Right-handed alpha
Helix 22	AC4	B	111	124	Right-handed alpha
Helix 23	AC5	B	125	127	Right-handed 310
Helix 24	AC6	B	128	144	Right-handed alpha
Helix 25	AC7	B	152	158	Right-handed alpha
Helix 26	AC8	B	164	169	Right-handed alpha
Helix 27	AC9	C	41	43	Right-handed 310
Helix 28	AD1	C	57	64	Right-handed alpha
Helix 29	AD2	C	65	67	Right-handed 310
Helix 30	AD3	C	79	82	Right-handed 310
Helix 31	AD4	D	58	63	Right-handed alpha
Helix 32	AD5	D	72	82	Right-handed alpha
Helix 33	AD6	D	87	105	Right-handed alpha
Helix 34	AD7	D	124	136	Right-handed alpha
Helix 35	AD8	D	155	170	Right-handed alpha
Helix 36	AD9	D	183	190	Right-handed alpha
Helix 37	AE1	D	191	200	Right-handed alpha
Helix 38	AE2	D	201	213	Right-handed alpha
Helix 39	AE3	D	238	244	Right-handed alpha
Helix 40	AE4	D	255	263	Right-handed alpha
Helix 41	AE5	D	291	303	Right-handed alpha
Helix 42	AE6	D	340	344	Right-handed 310
Helix 43	AE7	D	373	377	Right-handed 310
Helix 44	AE8	D	378	400	Right-handed alpha
Helix 45	AE9	E	3	16	Right-handed alpha
Helix 46	AF1	E	19	34	Right-handed alpha
Helix 47	AF2	E	43	47	Right-handed alpha
Helix 48	AF3	E	49	54	Right-handed alpha
Helix 49	AF4	E	57	66	Right-handed alpha
Helix 50	AF5	E	75	83	Right-handed alpha
Helix 51	AF6	E	84	86	Right-handed 310
Helix 52	AF7	E	90	103	Right-handed alpha
Helix 53	AF8	E	111	124	Right-handed alpha
Helix 54	AF9	E	128	144	Right-handed alpha
Helix 55	AG1	E	152	158	Right-handed alpha
Helix 56	AG2	E	164	169	Right-handed alpha
Helix 57	AG3	F	57	64	Right-handed alpha
Helix 58	AG4	F	65	67	Right-handed 310
Helix 59	AG5	F	79	82	Right-handed 310

There are 14 sheets in PDB entry 6TZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	39	40	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	218	221	parallel
Strand 3	A	225	227	anti-parallel
Strand 4	A	306	309	parallel
Strand 5	A	332	335	parallel
Strand 6	A	318	320	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	176	first strand
Strand 2	A	143	145	parallel
Strand 3	A	115	118	parallel
Strand 4	A	349	354	anti-parallel
Strand 5	A	359	364	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	265	first strand
Strand 2	A	288	290	parallel
Strand 3	A	278	280	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	73	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	9	first strand
Strand 2	C	72	77	anti-parallel
Strand 3	C	98	107	anti-parallel
Strand 4	C	22	26	anti-parallel
Strand 5	C	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	39	first strand
Strand 2	C	28	30	anti-parallel
Strand 3	C	98	107	anti-parallel
Strand 4	C	110	111	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	30	first strand
Strand 2	D	39	40	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	111	first strand
Strand 2	D	218	221	parallel
Strand 3	D	225	227	anti-parallel
Strand 4	D	306	309	parallel
Strand 5	D	332	335	parallel
Strand 6	D	318	320	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	176	first strand
Strand 2	D	143	145	parallel
Strand 3	D	115	118	parallel
Strand 4	D	349	354	anti-parallel
Strand 5	D	359	364	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	265	first strand
Strand 2	D	288	290	parallel
Strand 3	D	278	280	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	42	first strand
Strand 2	E	72	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	9	first strand
Strand 2	F	72	77	anti-parallel
Strand 3	F	98	107	anti-parallel
Strand 4	F	22	30	anti-parallel
Strand 5	F	47	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	39	first strand
Strand 2	F	22	30	anti-parallel
Strand 3	F	98	107	anti-parallel
Strand 4	F	110	111	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6TZ8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6TZ8