Analysis of interatomic Contacts of Structural Units in PDB entry:
6TZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6TZC entry

There are 3 chains in PDB entry 6TZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 28SER 394
B
 GLY 3MET 146
C
 THR 106SER 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6TZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 58Right-handed alpha
Helix 2
AA2
A
68 79Right-handed alpha
Helix 3
AA3
A
92 99Right-handed alpha
Helix 4
AA4
A
108 113Right-handed alpha
Helix 5
AA5
A
116 123Right-handed alpha
Helix 6
AA6
A
154 156Right-handed 310
Helix 7
AA7
A
157 169Right-handed alpha
Helix 8
AA8
A
179 182Right-handed 310
Helix 9
AA9
A
183 190Right-handed alpha
Helix 10
AB1
A
211 227Right-handed alpha
Helix 11
AB2
A
235 245Right-handed alpha
Helix 12
AB3
A
254 256Right-handed 310
Helix 13
AB4
A
257 265Right-handed alpha
Helix 14
AB5
A
298 309Right-handed alpha
Helix 15
AB6
A
312 323Right-handed alpha
Helix 16
AB7
A
330 338Right-handed alpha
Helix 17
AB8
A
340 352Right-handed alpha
Helix 18
AB9
A
361 378Right-handed alpha
Helix 19
AC1
A
382 394Right-handed alpha
Helix 20
AC2
B
4 16Right-handed alpha
Helix 21
AC3
B
16 24Right-handed alpha
Helix 22
AC4
B
28 32Right-handed 310
Helix 23
AC5
B
33 54Right-handed alpha
Helix 24
AC6
B
62 80Right-handed alpha
Helix 25
AC7
B
83 105Right-handed alpha
Helix 26
AC8
B
108 124Right-handed alpha
Helix 27
AC9
B
124 131Right-handed alpha
Helix 28
AD1
B
132 145Right-handed alpha
Helix 29
AD2
C
107 124Right-handed alpha
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There are 5 sheets in PDB entry 6TZC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
32 36parallel
Strand 3
A
85 89parallel
Strand 4
A
284 293anti-parallel
Strand 5
A
132 137anti-parallel
Strand 6
A
327 328anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
284 293anti-parallel
Strand 3
A
354 355parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
128 129anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
248 253parallel
Strand 3
A
140 144anti-parallel
Strand 4
A
268 271anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
202 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il