Analysis of interatomic Contacts of Structural Units in PDB entry:
6U00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U00 entry

There are 2 chains in PDB entry 6U00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 409PRO 630
B
 THR 409PRO 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6U00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
424 436Right-handed alpha
Helix 2
AA2
A
445 447Right-handed 310
Helix 3
AA3
A
454 462Right-handed alpha
Helix 4
AA4
A
479 494Right-handed alpha
Helix 5
AA5
A
495 497Right-handed 310
Helix 6
AA6
A
517 531Right-handed alpha
Helix 7
AA7
A
545 550Right-handed alpha
Helix 8
AA8
A
552 558Right-handed alpha
Helix 9
AA9
A
568 572Right-handed 310
Helix 10
AB1
A
585 605Right-handed alpha
Helix 11
AB2
A
614 627Right-handed alpha
Helix 12
AB3
B
424 436Right-handed alpha
Helix 13
AB4
B
445 447Right-handed 310
Helix 14
AB5
B
454 462Right-handed alpha
Helix 15
AB6
B
479 494Right-handed alpha
Helix 16
AB7
B
495 497Right-handed 310
Helix 17
AB8
B
517 529Right-handed alpha
Helix 18
AB9
B
544 551Right-handed alpha
Helix 19
AC1
B
551 558Right-handed alpha
Helix 20
AC2
B
568 572Right-handed 310
Helix 21
AC3
B
585 605Right-handed alpha
Helix 22
AC4
B
614 628Right-handed alpha
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There are 2 sheets in PDB entry 6U00. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 443first strand
Strand 2
A
470 474parallel
Strand 3
A
411 418parallel
Strand 4
A
503 510parallel
Strand 5
A
574 577parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
440 443first strand
Strand 2
B
470 474parallel
Strand 3
B
411 418parallel
Strand 4
B
503 510parallel
Strand 5
B
574 577parallel
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