Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U0H entry

There are 2 chains in PDB entry 6U0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 439
B
 MET 1ALA 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6U0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 28Right-handed alpha
Helix 2
AA2
A
48 51Right-handed 310
Helix 3
AA3
A
71 81Right-handed alpha
Helix 4
AA4
A
102 109Right-handed alpha
Helix 5
AA5
A
110 127Right-handed alpha
Helix 6
AA6
A
144 162Right-handed alpha
Helix 7
AA7
A
184 195Right-handed alpha
Helix 8
AA8
A
206 216Right-handed alpha
Helix 9
AA9
A
223 244Right-handed alpha
Helix 10
AB1
A
253 259Right-handed alpha
Helix 11
AB2
A
277 282Right-handed alpha
Helix 12
AB3
A
287 296Right-handed alpha
Helix 13
AB4
A
306 310Right-handed 310
Helix 14
AB5
A
324 338Right-handed alpha
Helix 15
AB6
A
384 400Right-handed alpha
Helix 16
AB7
A
405 410Right-handed alpha
Helix 17
AB8
A
416 436Right-handed alpha
Helix 18
AB9
B
10 29Right-handed alpha
Helix 19
AC1
B
41 46Right-handed alpha
Helix 20
AC2
B
47 49Right-handed 310
Helix 21
AC3
B
70 79Right-handed alpha
Helix 22
AC4
B
100 106Right-handed alpha
Helix 23
AC5
B
108 125Right-handed alpha
Helix 24
AC6
B
141 159Right-handed alpha
Helix 25
AC7
B
180 193Right-handed alpha
Helix 26
AC8
B
203 214Right-handed alpha
Helix 27
AC9
B
221 242Right-handed alpha
Helix 28
AD1
B
250 257Right-handed alpha
Helix 29
AD2
B
285 294Right-handed alpha
Helix 30
AD3
B
295 299Right-handed 310
Helix 31
AD4
B
304 308Right-handed 310
Helix 32
AD5
B
322 337Right-handed alpha
Helix 33
AD6
B
374 390Right-handed alpha
Helix 34
AD7
B
395 401Right-handed alpha
Helix 35
AD8
B
404 428Right-handed alpha
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There are 5 sheets in PDB entry 6U0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
65 69parallel
Strand 3
A
3 9parallel
Strand 4
A
132 140parallel
Strand 5
A
165 171parallel
Strand 6
A
200 203parallel
Strand 7
A
267 273parallel
Strand 8
A
374 381anti-parallel
Strand 9
A
312 320anti-parallel
Strand 10
A
351 356parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
61 63anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
63 67parallel
Strand 3
B
3 9parallel
Strand 4
B
130 137parallel
Strand 5
B
163 166parallel
Strand 6
B
198 200parallel
Strand 7
B
265 266parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
58 61anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 271first strand
Strand 2
B
363 371anti-parallel
Strand 3
B
310 319anti-parallel
Strand 4
B
349 353parallel
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