Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U0L entry

There are 21 chains in PDB entry 6U0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 33	CYS 501
B	ASN 33	LYS 502
C	TRP 35	LYS 502
D	LYS 1	VAL 97
E	LYS 1	VAL 97
F	LYS 1	VAL 97
H	VAL 2	ASP 100
H	ALA 100	ASP 100
H	ASP 100	SER 112
I	VAL 2	ASP 100
I	ALA 100	ASP 100
I	ASP 100	SER 112
J	GLN 2	LEU 107
L	GLN 2	LEU 107
P	VAL 2	ASP 100
P	ALA 100	ASP 100
P	ASP 100	SER 112
Q	GLN 2	LEU 107
X	ALA 512	ASN 656
Y	GLY 514	GLU 654
Z	PHE 519	ASP 659

There are 45 helices in PDB entry 6U0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	116	Right-handed alpha
Helix 2	AA2	A	334	348	Right-handed alpha
Helix 3	AA3	A	349	354	Right-handed alpha
Helix 4	AA4	A	368	373	Right-handed alpha
Helix 5	AA5	A	476	481	Right-handed alpha
Helix 6	AA6	B	64	73	Right-handed alpha
Helix 7	AA7	B	100	105	Right-handed alpha
Helix 8	AA8	B	105	113	Right-handed alpha
Helix 9	AA9	B	338	350	Right-handed alpha
Helix 10	AB1	B	474	479	Right-handed 310
Helix 11	AB2	C	64	70	Right-handed alpha
Helix 12	AB3	C	99	116	Right-handed alpha
Helix 13	AB4	C	334	353	Right-handed alpha
Helix 14	AB5	C	368	373	Right-handed alpha
Helix 15	AB6	C	474	480	Right-handed alpha
Helix 16	AB7	D	58	64	Right-handed 310
Helix 17	AB8	E	58	64	Right-handed 310
Helix 18	AB9	F	58	64	Right-handed 310
Helix 19	AC1	H	73	75	Right-handed 310
Helix 20	AC2	H	100	100	Right-handed 310
Helix 21	AC3	I	83	87	Right-handed 310
Helix 22	AC4	I	98	100	Right-handed 310
Helix 23	AC5	P	83	87	Right-handed 310
Helix 24	AC6	Q	79	83	Right-handed 310
Helix 25	AC7	X	516	522	Right-handed alpha
Helix 26	AC8	X	529	544	Right-handed alpha
Helix 27	AC9	X	560	574	Right-handed alpha
Helix 28	AD1	X	578	591	Right-handed alpha
Helix 29	AD2	X	591	597	Right-handed alpha
Helix 30	AD3	X	618	624	Right-handed alpha
Helix 31	AD4	X	627	636	Right-handed alpha
Helix 32	AD5	X	638	653	Right-handed alpha
Helix 33	AD6	Y	514	516	Right-handed 310
Helix 34	AD7	Y	517	522	Right-handed alpha
Helix 35	AD8	Y	523	526	Right-handed 310
Helix 36	AD9	Y	529	544	Right-handed alpha
Helix 37	AE1	Y	561	566	Right-handed alpha
Helix 38	AE2	Y	569	577	Right-handed alpha
Helix 39	AE3	Y	580	596	Right-handed alpha
Helix 40	AE4	Y	627	636	Right-handed alpha
Helix 41	AE5	Y	638	653	Right-handed alpha
Helix 42	AE6	Z	529	541	Right-handed alpha
Helix 43	AE7	Z	564	597	Right-handed alpha
Helix 44	AE8	Z	628	635	Right-handed alpha
Helix 45	AE9	Z	638	657	Right-handed alpha

There are 46 sheets in PDB entry 6U0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	497	first strand
Strand 2	A	36	40	anti-parallel
Strand 3	X	603	606	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	486	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	85	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	93	first strand
Strand 2	A	237	238	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	202	first strand
Strand 2	A	120	124	anti-parallel
Strand 3	A	433	434	anti-parallel
Strand 4	A	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	447	454	anti-parallel
Strand 3	A	284	286	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	447	454	anti-parallel
Strand 3	A	292	297	anti-parallel
Strand 4	A	330	333	anti-parallel
Strand 5	A	414	416	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	384	first strand
Strand 2	A	419	421	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	495	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	498	499	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	495	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	Y	603	609	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	243	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	237	239	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	432	434	anti-parallel
Strand 3	B	423	425	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	225	first strand
Strand 2	B	488	490	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	273	first strand
Strand 2	B	284	298	anti-parallel
Strand 3	B	329	333	anti-parallel
Strand 4	B	414	418	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	273	first strand
Strand 2	B	284	298	anti-parallel
Strand 3	B	443	454	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	360	first strand
Strand 2	B	394	395	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	375	first strand
Strand 2	B	382	385	anti-parallel
Strand 3	B	420	421	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	40	first strand
Strand 2	C	494	495	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	56	first strand
Strand 2	C	215	217	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	237	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	202	first strand
Strand 2	C	120	125	anti-parallel
Strand 3	C	432	434	anti-parallel
Strand 4	C	423	425	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	245	first strand
Strand 2	C	224	226	anti-parallel
Strand 3	C	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	284	287	anti-parallel
Strand 3	C	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	383	384	first strand
Strand 2	C	414	420	anti-parallel
Strand 3	C	328	333	anti-parallel
Strand 4	C	294	298	anti-parallel
Strand 5	C	443	447	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	361	first strand
Strand 2	C	467	468	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	91	96	parallel
Strand 3	D	81	84	anti-parallel
Strand 4	D	27	30	anti-parallel
Strand 5	D	35	40	anti-parallel
Strand 6	D	43	46	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	17	first strand
Strand 2	D	66	71	anti-parallel
Strand 3	D	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	5	first strand
Strand 2	E	91	96	parallel
Strand 3	E	81	84	anti-parallel
Strand 4	E	27	30	anti-parallel
Strand 5	E	35	40	anti-parallel
Strand 6	E	43	46	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	17	first strand
Strand 2	E	66	71	anti-parallel
Strand 3	E	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	5	first strand
Strand 2	F	91	96	parallel
Strand 3	F	81	84	anti-parallel
Strand 4	F	27	30	anti-parallel
Strand 5	F	35	40	anti-parallel
Strand 6	F	43	46	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	17	first strand
Strand 2	F	66	71	anti-parallel
Strand 3	F	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	17	24	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	93	anti-parallel
Strand 4	H	35	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	6	first strand
Strand 2	I	17	24	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	107	111	parallel
Strand 3	I	88	96	anti-parallel
Strand 4	I	32	39	anti-parallel
Strand 5	I	45	52	anti-parallel
Strand 6	I	56	59	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	13	first strand
Strand 2	J	102	106	parallel
Strand 3	J	85	88	anti-parallel
Strand 4	J	35	38	anti-parallel
Strand 5	J	45	48	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	18	24	first strand
Strand 2	J	70	76	anti-parallel
Strand 3	J	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	90	92	first strand
Strand 2	J	95	97	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	24	first strand
Strand 2	L	70	76	anti-parallel
Strand 3	L	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	33	38	anti-parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	95	97	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	5	6	first strand
Strand 2	P	18	23	anti-parallel
Strand 3	P	77	82	anti-parallel
Strand 4	P	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	12	first strand
Strand 2	P	107	111	parallel
Strand 3	P	88	96	anti-parallel
Strand 4	P	32	39	anti-parallel
Strand 5	P	45	52	anti-parallel
Strand 6	P	56	59	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	13	first strand
Strand 2	Q	102	106	parallel
Strand 3	Q	85	92	anti-parallel
Strand 4	Q	33	38	anti-parallel
Strand 5	Q	45	49	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	13	first strand
Strand 2	Q	102	106	parallel
Strand 3	Q	85	92	anti-parallel
Strand 4	Q	95	98	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	19	24	first strand
Strand 2	Q	70	75	anti-parallel
Strand 3	Q	63	67	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0L