Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U0N entry

There are 21 chains in PDB entry 6U0N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 33	ARG 503
B	TRP 35	LYS 502
C	LEU 34	LYS 502
D	LYS 1	VAL 97
E	LYS 1	VAL 97
F	LYS 1	VAL 97
H	VAL 2	ASP 100
H	ALA 100	ASP 100
H	ASP 100	SER 112
I	VAL 2	ASP 100
I	ALA 100	ASP 100
I	ASP 100	SER 112
J	GLN 2	LEU 107
L	GLN 2	LEU 107
P	VAL 2	ASP 100
P	ALA 100	ASP 100
P	ASP 100	SER 112
Q	GLN 2	LEU 107
X	ALA 512	GLN 653
Y	GLY 521	LEU 660
Z	VAL 518	GLU 657

There are 44 helices in PDB entry 6U0N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	104	113	Right-handed alpha
Helix 2	AA2	A	335	351	Right-handed alpha
Helix 3	AA3	A	368	373	Right-handed alpha
Helix 4	AA4	A	475	481	Right-handed alpha
Helix 5	AA5	B	65	70	Right-handed alpha
Helix 6	AA6	B	103	110	Right-handed alpha
Helix 7	AA7	B	335	350	Right-handed alpha
Helix 8	AA8	B	368	373	Right-handed alpha
Helix 9	AA9	B	474	479	Right-handed 310
Helix 10	AB1	C	101	109	Right-handed alpha
Helix 11	AB2	C	340	353	Right-handed alpha
Helix 12	AB3	C	475	481	Right-handed alpha
Helix 13	AB4	D	58	65	Right-handed 310
Helix 14	AB5	E	58	65	Right-handed 310
Helix 15	AB6	F	58	64	Right-handed 310
Helix 16	AB7	H	28	32	Right-handed 310
Helix 17	AB8	H	83	87	Right-handed 310
Helix 18	AB9	H	96	100	Right-handed 310
Helix 19	AC1	I	83	87	Right-handed 310
Helix 20	AC2	I	98	100	Right-handed 310
Helix 21	AC3	P	83	87	Right-handed 310
Helix 22	AC4	P	96	100	Right-handed 310
Helix 23	AC5	Q	79	83	Right-handed 310
Helix 24	AC6	X	516	523	Right-handed alpha
Helix 25	AC7	X	529	535	Right-handed alpha
Helix 26	AC8	X	536	545	Right-handed alpha
Helix 27	AC9	X	569	574	Right-handed alpha
Helix 28	AD1	X	578	594	Right-handed alpha
Helix 29	AD2	X	618	622	Right-handed 310
Helix 30	AD3	X	628	633	Right-handed alpha
Helix 31	AD4	X	641	649	Right-handed alpha
Helix 32	AD5	Y	529	537	Right-handed alpha
Helix 33	AD6	Y	538	543	Right-handed alpha
Helix 34	AD7	Y	569	574	Right-handed alpha
Helix 35	AD8	Y	576	588	Right-handed alpha
Helix 36	AD9	Y	589	596	Right-handed alpha
Helix 37	AE1	Y	620	625	Right-handed alpha
Helix 38	AE2	Y	627	635	Right-handed alpha
Helix 39	AE3	Y	638	658	Right-handed alpha
Helix 40	AE4	Z	529	534	Right-handed alpha
Helix 41	AE5	Z	563	575	Right-handed alpha
Helix 42	AE6	Z	576	596	Right-handed alpha
Helix 43	AE7	Z	627	635	Right-handed alpha
Helix 44	AE8	Z	638	654	Right-handed alpha

There are 51 sheets in PDB entry 6U0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	498	499	first strand
Strand 2	A	35	38	anti-parallel
Strand 3	X	604	609	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	486	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	85	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	237	239	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	432	434	anti-parallel
Strand 3	A	423	425	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	443	456	anti-parallel
Strand 3	A	284	298	anti-parallel
Strand 4	A	466	470	first strand
Strand 5	A	359	360	parallel
Strand 6	A	394	395	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	273	first strand
Strand 2	A	284	298	anti-parallel
Strand 3	A	443	456	anti-parallel
Strand 4	A	330	334	first strand
Strand 5	A	413	414	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	375	first strand
Strand 2	A	384	385	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	38	first strand
Strand 2	B	496	498	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	215	218	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	237	239	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	202	first strand
Strand 2	B	120	126	anti-parallel
Strand 3	B	432	434	anti-parallel
Strand 4	B	423	425	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	245	first strand
Strand 2	B	223	228	anti-parallel
Strand 3	B	488	490	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	287	anti-parallel
Strand 3	B	452	457	anti-parallel
Strand 4	B	465	470	anti-parallel
Strand 5	B	358	361	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	418	first strand
Strand 2	B	329	334	anti-parallel
Strand 3	B	292	298	anti-parallel
Strand 4	B	443	444	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	418	first strand
Strand 2	B	329	334	anti-parallel
Strand 3	B	292	298	anti-parallel
Strand 4	B	447	449	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	377	first strand
Strand 2	B	382	384	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	497	first strand
Strand 2	C	35	40	anti-parallel
Strand 3	Z	603	609	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	217	218	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	86	first strand
Strand 2	C	242	245	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	486	490	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	237	239	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	432	434	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	286	first strand
Strand 2	C	452	454	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	417	first strand
Strand 2	C	330	333	anti-parallel
Strand 3	C	292	298	anti-parallel
Strand 4	C	443	449	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	393	395	first strand
Strand 2	C	359	361	anti-parallel
Strand 3	C	467	468	parallel
Strand 4	C	456	457	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	378	first strand
Strand 2	C	381	385	anti-parallel
Strand 3	C	420	421	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	92	96	parallel
Strand 3	D	80	84	anti-parallel
Strand 4	D	27	29	anti-parallel
Strand 5	D	35	40	anti-parallel
Strand 6	D	43	44	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	68	71	anti-parallel
Strand 3	D	55	56	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	5	first strand
Strand 2	E	90	96	parallel
Strand 3	E	81	85	anti-parallel
Strand 4	E	27	29	anti-parallel
Strand 5	E	37	40	anti-parallel
Strand 6	E	43	44	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	70	71	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	5	first strand
Strand 2	F	93	96	parallel
Strand 3	F	81	82	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	70	71	anti-parallel
Strand 3	F	55	56	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	17	first strand
Strand 2	F	66	67	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	22	24	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	93	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	20	first strand
Strand 2	H	77	82	anti-parallel
Strand 3	H	67	72	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	6	first strand
Strand 2	I	18	24	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	72	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	107	111	parallel
Strand 3	I	89	96	anti-parallel
Strand 4	I	32	39	anti-parallel
Strand 5	I	46	52	anti-parallel
Strand 6	I	56	59	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	107	111	parallel
Strand 3	I	89	96	anti-parallel
Strand 4	I	102	103	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	13	first strand
Strand 2	J	103	106	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	19	23	first strand
Strand 2	J	71	75	anti-parallel
Strand 3	J	62	64	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	48	first strand
Strand 2	J	33	38	anti-parallel
Strand 3	J	85	92	anti-parallel
Strand 4	J	95	98	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	12	13	first strand
Strand 2	L	105	106	parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	67	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	33	38	anti-parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	95	98	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	33	38	anti-parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	102	103	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	5	6	first strand
Strand 2	P	20	23	anti-parallel
Strand 3	P	77	82	anti-parallel
Strand 4	P	67	68	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	5	6	first strand
Strand 2	P	20	23	anti-parallel
Strand 3	P	77	82	anti-parallel
Strand 4	P	71	72	anti-parallel

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There are 6 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	12	first strand
Strand 2	P	107	111	parallel
Strand 3	P	88	91	anti-parallel
Strand 4	P	35	39	anti-parallel
Strand 5	P	45	52	anti-parallel
Strand 6	P	56	59	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	23	24	first strand
Strand 2	Q	70	75	anti-parallel
Strand 3	Q	62	67	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	45	48	first strand
Strand 2	Q	33	38	anti-parallel
Strand 3	Q	85	92	anti-parallel
Strand 4	Q	95	97	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	45	48	first strand
Strand 2	Q	33	38	anti-parallel
Strand 3	Q	85	92	anti-parallel
Strand 4	Q	102	103	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U0N

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0N