Analysis of interatomic Contacts of Structural Units in PDB entry:
6U1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U1Q entry

There are 2 chains in PDB entry 6U1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 504ALA 711
B
 ALA 508ASN 710
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6U1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
506 522Right-handed alpha
Helix 2
AA2
A
523 533Right-handed alpha
Helix 3
AA3
A
550 564Right-handed alpha
Helix 4
AA4
A
579 584Right-handed alpha
Helix 5
AA5
A
592 598Right-handed alpha
Helix 6
AA6
A
626 632Right-handed alpha
Helix 7
AA7
A
633 645Right-handed alpha
Helix 8
AA8
A
661 667Right-handed alpha
Helix 9
AA9
A
668 670Right-handed 310
Helix 10
AB1
A
683 696Right-handed alpha
Helix 11
AB2
B
509 522Right-handed alpha
Helix 12
AB3
B
523 533Right-handed alpha
Helix 13
AB4
B
550 563Right-handed alpha
Helix 14
AB5
B
579 584Right-handed alpha
Helix 15
AB6
B
592 598Right-handed alpha
Helix 16
AB7
B
626 632Right-handed alpha
Helix 17
AB8
B
633 645Right-handed alpha
Helix 18
AB9
B
661 668Right-handed alpha
Helix 19
AC1
B
683 696Right-handed alpha
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There are 2 sheets in PDB entry 6U1Q. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
608 609first strand
Strand 2
A
616 618anti-parallel
Strand 3
A
568 572parallel
Strand 4
A
649 653parallel
Strand 5
A
539 543parallel
Strand 6
A
672 678parallel
Strand 7
A
701 707parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
608 609first strand
Strand 2
B
616 618anti-parallel
Strand 3
B
568 572parallel
Strand 4
B
649 653parallel
Strand 5
B
539 544parallel
Strand 6
B
672 678parallel
Strand 7
B
701 707parallel
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