Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U5V entry

There are 2 chains in PDB entry 6U5V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 1747
B	ARG 5	GLU 2037

There are173 helices in PDB entry 6U5V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	22	Right-handed alpha
Helix 2	AA2	A	28	36	Right-handed alpha
Helix 3	AA3	A	53	65	Right-handed alpha
Helix 4	AA4	A	65	72	Right-handed alpha
Helix 5	AA5	A	147	161	Right-handed alpha
Helix 6	AA6	A	163	167	Right-handed 310
Helix 7	AA7	A	172	178	Right-handed alpha
Helix 8	AA8	A	180	195	Right-handed alpha
Helix 9	AA9	A	207	214	Right-handed alpha
Helix 10	AB1	A	222	237	Right-handed alpha
Helix 11	AB2	A	243	252	Right-handed alpha
Helix 12	AB3	A	258	264	Right-handed alpha
Helix 13	AB4	A	266	272	Right-handed alpha
Helix 14	AB5	A	280	300	Right-handed alpha
Helix 15	AB6	A	325	348	Right-handed alpha
Helix 16	AB7	A	353	365	Right-handed alpha
Helix 17	AB8	A	365	382	Right-handed alpha
Helix 18	AB9	A	382	389	Right-handed alpha
Helix 19	AC1	A	394	398	Right-handed 310
Helix 20	AC2	A	403	421	Right-handed alpha
Helix 21	AC3	A	429	440	Right-handed alpha
Helix 22	AC4	A	443	456	Right-handed alpha
Helix 23	AC5	A	458	462	Right-handed 310
Helix 24	AC6	A	463	483	Right-handed alpha
Helix 25	AC7	A	520	530	Right-handed alpha
Helix 26	AC8	A	629	633	Right-handed 310
Helix 27	AC9	A	655	672	Right-handed alpha
Helix 28	AD1	A	690	695	Right-handed alpha
Helix 29	AD2	A	695	701	Right-handed alpha
Helix 30	AD3	A	714	729	Right-handed alpha
Helix 31	AD4	A	744	756	Right-handed alpha
Helix 32	AD5	A	788	799	Right-handed alpha
Helix 33	AD6	A	802	813	Right-handed alpha
Helix 34	AD7	A	838	844	Right-handed alpha
Helix 35	AD8	A	845	850	Right-handed 310
Helix 36	AD9	A	851	856	Right-handed alpha
Helix 37	AE1	A	881	883	Right-handed 310
Helix 38	AE2	A	884	890	Right-handed alpha
Helix 39	AE3	A	898	907	Right-handed alpha
Helix 40	AE4	A	910	918	Right-handed alpha
Helix 41	AE5	A	929	933	Right-handed 310
Helix 42	AE6	A	935	970	Right-handed alpha
Helix 43	AE7	A	973	977	Right-handed 310
Helix 44	AE8	A	997	1005	Right-handed alpha
Helix 45	AE9	A	1013	1016	Right-handed 310
Helix 46	AF1	A	1031	1041	Right-handed alpha
Helix 47	AF2	A	1048	1056	Right-handed alpha
Helix 48	AF3	A	1086	1099	Right-handed alpha
Helix 49	AF4	A	1106	1111	Right-handed 310
Helix 50	AF5	A	1114	1117	Right-handed 310
Helix 51	AF6	A	1136	1148	Right-handed alpha
Helix 52	AF7	A	1200	1207	Right-handed alpha
Helix 53	AF8	A	1208	1224	Right-handed alpha
Helix 54	AF9	A	1229	1233	Right-handed 310
Helix 55	AG1	A	1238	1240	Right-handed 310
Helix 56	AG2	A	1252	1261	Right-handed alpha
Helix 57	AG3	A	1272	1276	Right-handed 310
Helix 58	AG4	A	1281	1290	Right-handed alpha
Helix 59	AG5	A	1308	1320	Right-handed alpha
Helix 60	AG6	A	1335	1345	Right-handed alpha
Helix 61	AG7	A	1351	1357	Right-handed alpha
Helix 62	AG8	A	1360	1364	Right-handed 310
Helix 63	AG9	A	1389	1396	Right-handed alpha
Helix 64	AH1	A	1422	1428	Right-handed 310
Helix 65	AH2	A	1439	1442	Right-handed 310
Helix 66	AH3	A	1443	1477	Right-handed alpha
Helix 67	AH4	A	1485	1513	Right-handed alpha
Helix 68	AH5	A	1524	1531	Right-handed alpha
Helix 69	AH6	A	1532	1534	Right-handed 310
Helix 70	AH7	A	1536	1538	Right-handed 310
Helix 71	AH8	A	1552	1568	Right-handed alpha
Helix 72	AH9	A	1581	1586	Right-handed alpha
Helix 73	AI1	A	1588	1590	Right-handed 310
Helix 74	AI2	A	1591	1607	Right-handed alpha
Helix 75	AI3	A	1619	1623	Right-handed 310
Helix 76	AI4	A	1662	1665	Right-handed 310
Helix 77	AI5	A	1670	1699	Right-handed alpha
Helix 78	AI6	A	1715	1720	Right-handed alpha
Helix 79	AI7	B	21	23	Right-handed 310
Helix 80	AI8	B	24	36	Right-handed alpha
Helix 81	AI9	B	54	66	Right-handed alpha
Helix 82	AJ1	B	74	87	Right-handed alpha
Helix 83	AJ2	B	93	102	Right-handed alpha
Helix 84	AJ3	B	111	116	Right-handed alpha
Helix 85	AJ4	B	118	126	Right-handed alpha
Helix 86	AJ5	B	159	170	Right-handed alpha
Helix 87	AJ6	B	170	187	Right-handed alpha
Helix 88	AJ7	B	189	193	Right-handed 310
Helix 89	AJ8	B	201	208	Right-handed alpha
Helix 90	AJ9	B	209	212	Right-handed 310
Helix 91	AK1	B	214	219	Right-handed alpha
Helix 92	AK2	B	220	243	Right-handed alpha
Helix 93	AK3	B	246	251	Right-handed alpha
Helix 94	AK4	B	263	273	Right-handed alpha
Helix 95	AK5	B	275	288	Right-handed alpha
Helix 96	AK6	B	288	301	Right-handed alpha
Helix 97	AK7	B	307	317	Right-handed alpha
Helix 98	AK8	B	332	344	Right-handed alpha
Helix 99	AK9	B	345	347	Right-handed 310
Helix 100	AL1	B	369	384	Right-handed alpha
Helix 101	AL2	B	386	394	Right-handed 310
Helix 102	AL3	B	395	399	Right-handed 310
Helix 103	AL4	B	416	418	Right-handed 310
Helix 104	AL5	B	419	433	Right-handed alpha
Helix 105	AL6	B	460	469	Right-handed alpha
Helix 106	AL7	B	475	479	Right-handed alpha
Helix 107	AL8	B	492	495	Right-handed 310
Helix 108	AL9	B	496	505	Right-handed alpha
Helix 109	AM1	B	531	534	Right-handed 310
Helix 110	AM2	B	547	552	Right-handed alpha
Helix 111	AM3	B	568	575	Right-handed alpha
Helix 112	AM4	B	609	611	Right-handed 310
Helix 113	AM5	B	613	626	Right-handed alpha
Helix 114	AM6	B	644	660	Right-handed alpha
Helix 115	AM7	B	674	684	Right-handed alpha
Helix 116	AM8	B	696	708	Right-handed alpha
Helix 117	AM9	B	733	739	Right-handed alpha
Helix 118	AN1	B	740	745	Right-handed alpha
Helix 119	AN2	B	760	770	Right-handed alpha
Helix 120	AN3	B	772	776	Right-handed 310
Helix 121	AN4	B	791	795	Right-handed 310
Helix 122	AN5	B	801	811	Right-handed alpha
Helix 123	AN6	B	815	824	Right-handed 310
Helix 124	AN7	B	846	859	Right-handed alpha
Helix 125	AN8	B	863	865	Right-handed 310
Helix 126	AN9	B	866	874	Right-handed alpha
Helix 127	AO1	B	874	885	Right-handed alpha
Helix 128	AO2	B	900	904	Right-handed 310
Helix 129	AO3	B	905	917	Right-handed alpha
Helix 130	AO4	B	927	946	Right-handed alpha
Helix 131	AO5	B	957	962	Right-handed 310
Helix 132	AO6	B	963	972	Right-handed alpha
Helix 133	AO7	B	987	996	Right-handed alpha
Helix 134	AO8	B	1013	1018	Right-handed alpha
Helix 135	AO9	B	1022	1031	Right-handed 310
Helix 136	AP1	B	1035	1039	Right-handed 310
Helix 137	AP2	B	1046	1051	Right-handed 310
Helix 138	AP3	B	1057	1078	Right-handed alpha
Helix 139	AP4	B	1102	1106	Right-handed 310
Helix 140	AP5	B	1122	1130	Right-handed alpha
Helix 141	AP6	B	1136	1144	Right-handed alpha
Helix 142	AP7	B	1157	1162	Right-handed alpha
Helix 143	AP8	B	1241	1255	Right-handed alpha
Helix 144	AP9	B	1279	1291	Right-handed alpha
Helix 145	AQ1	B	1308	1310	Right-handed 310
Helix 146	AQ2	B	1311	1316	Right-handed alpha
Helix 147	AQ3	B	1316	1321	Right-handed alpha
Helix 148	AQ4	B	1322	1324	Right-handed 310
Helix 149	AQ5	B	1332	1336	Right-handed 310
Helix 150	AQ6	B	1425	1431	Right-handed alpha
Helix 151	AQ7	B	1497	1506	Right-handed alpha
Helix 152	AQ8	B	1536	1544	Right-handed alpha
Helix 153	AQ9	B	1547	1552	Right-handed alpha
Helix 154	AR1	B	1552	1559	Right-handed alpha
Helix 155	AR2	B	1567	1583	Right-handed alpha
Helix 156	AR3	B	1664	1670	Right-handed alpha
Helix 157	AR4	B	1671	1686	Right-handed alpha
Helix 158	AR5	B	1692	1699	Right-handed alpha
Helix 159	AR6	B	1713	1723	Right-handed alpha
Helix 160	AR7	B	1757	1760	Right-handed 310
Helix 161	AR8	B	1761	1783	Right-handed alpha
Helix 162	AR9	B	1797	1804	Right-handed alpha
Helix 163	AS1	B	1811	1828	Right-handed alpha
Helix 164	AS2	B	1855	1871	Right-handed alpha
Helix 165	AS3	B	1892	1908	Right-handed alpha
Helix 166	AS4	B	1914	1919	Right-handed alpha
Helix 167	AS5	B	1928	1941	Right-handed alpha
Helix 168	AS6	B	1966	1971	Right-handed 310
Helix 169	AS7	B	1972	1984	Right-handed alpha
Helix 170	AS8	B	1985	1989	Right-handed 310
Helix 171	AS9	B	1990	1994	Right-handed 310
Helix 172	AT1	B	2010	2022	Right-handed alpha
Helix 173	AT2	B	2024	2032	Right-handed alpha

There are 28 sheets in PDB entry 6U5V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	B	1874	1881	parallel
Strand 3	B	1885	1891	anti-parallel
Strand 4	B	1840	1845	anti-parallel
Strand 5	B	1954	1956	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	43	47	parallel
Strand 3	B	1649	1653	parallel
Strand 4	B	1791	1794	parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	399	401	first strand
Strand 2	A	734	739	anti-parallel
Strand 3	A	705	710	parallel
Strand 4	A	680	684	parallel
Strand 5	A	770	773	parallel
Strand 6	A	820	826	parallel
Strand 7	A	862	869	parallel
Strand 8	A	922	926	parallel
Strand 9	A	643	648	anti-parallel
Strand 10	A	651	654	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	502	first strand
Strand 2	A	508	511	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	872	873	first strand
Strand 2	A	896	897	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1018	1026	first strand
Strand 2	A	1380	1388	anti-parallel
Strand 3	A	1325	1332	anti-parallel
Strand 4	A	1242	1244	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1059	1066	first strand
Strand 2	A	1069	1076	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1101	1104	first strand
Strand 2	A	1184	1187	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1125	first strand
Strand 2	A	1171	1178	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1133	1135	first strand
Strand 2	A	1162	1166	anti-parallel
Strand 3	A	1151	1155	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1402	1409	first strand
Strand 2	A	1653	1660	anti-parallel
Strand 3	A	1642	1649	anti-parallel
Strand 4	A	1540	1544	parallel
Strand 5	A	1576	1579	parallel
Strand 6	A	1628	1629	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1608	1609	first strand
Strand 2	A	1635	1636	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1727	1729	first strand
Strand 2	A	1732	1734	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	14	19	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	259	first strand
Strand 2	B	146	150	parallel
Strand 3	B	485	488	parallel
Strand 4	B	511	514	parallel
Strand 5	B	528	529	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	407	first strand
Strand 2	B	325	329	anti-parallel
Strand 3	B	363	367	anti-parallel
Strand 4	B	354	358	anti-parallel
Strand 5	B	473	474	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	558	first strand
Strand 2	B	564	567	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	579	581	first strand
Strand 2	B	785	788	parallel
Strand 3	B	750	754	parallel
Strand 4	B	715	719	parallel
Strand 5	B	689	692	parallel
Strand 6	B	663	669	parallel
Strand 7	B	634	639	parallel
Strand 8	B	605	607	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	727	first strand
Strand 2	B	840	844	anti-parallel
Strand 3	B	830	834	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	893	894	first strand
Strand 2	B	897	898	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	918	919	first strand
Strand 2	B	924	925	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1111	1115	first strand
Strand 2	B	1169	1173	anti-parallel
Strand 3	B	1178	1185	anti-parallel
Strand 4	B	1188	1198	anti-parallel
Strand 5	B	1202	1209	anti-parallel
Strand 6	B	1224	1226	anti-parallel
Strand 7	B	1235	1237	anti-parallel
Strand 8	B	1146	1149	parallel
Strand 9	B	1154	1155	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1111	1115	first strand
Strand 2	B	1169	1173	anti-parallel
Strand 3	B	1178	1185	anti-parallel
Strand 4	B	1188	1198	anti-parallel
Strand 5	B	1202	1209	anti-parallel
Strand 6	B	1218	1221	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1271	1272	first strand
Strand 2	B	1357	1370	anti-parallel
Strand 3	B	1276	1277	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1387	1399	first strand
Strand 2	B	1373	1384	anti-parallel
Strand 3	B	1357	1370	anti-parallel
Strand 4	B	1409	1413	anti-parallel
Strand 5	B	1446	1457	anti-parallel
Strand 6	B	1417	1420	anti-parallel
Strand 7	B	1508	1509	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1446	1457	first strand
Strand 2	B	1463	1475	anti-parallel
Strand 3	B	1481	1494	anti-parallel
Strand 4	B	1436	1438	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1387	1399	first strand
Strand 2	B	1340	1345	anti-parallel
Strand 3	B	1591	1598	anti-parallel
Strand 4	B	1636	1644	anti-parallel
Strand 5	B	1621	1630	anti-parallel
Strand 6	B	1607	1618	anti-parallel
Strand 7	B	1530	1531	anti-parallel
Strand 8	B	1607	1618	anti-parallel
Strand 9	B	1514	1521	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1703	1707	first strand
Strand 2	B	1749	1753	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U5V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5V