Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U5W entry

There are 2 chains in PDB entry 6U5W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 1746
B	ARG 5	GLU 2037

There are162 helices in PDB entry 6U5W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	22	Right-handed alpha
Helix 2	AA2	A	27	38	Right-handed alpha
Helix 3	AA3	A	53	65	Right-handed alpha
Helix 4	AA4	A	65	73	Right-handed alpha
Helix 5	AA5	A	84	89	Right-handed alpha
Helix 6	AA6	A	325	349	Right-handed alpha
Helix 7	AA7	A	353	381	Right-handed alpha
Helix 8	AA8	A	381	388	Right-handed alpha
Helix 9	AA9	A	393	397	Right-handed 310
Helix 10	AB1	A	402	420	Right-handed alpha
Helix 11	AB2	A	427	439	Right-handed alpha
Helix 12	AB3	A	442	455	Right-handed alpha
Helix 13	AB4	A	457	460	Right-handed 310
Helix 14	AB5	A	461	482	Right-handed alpha
Helix 15	AB6	A	519	530	Right-handed alpha
Helix 16	AB7	A	628	632	Right-handed 310
Helix 17	AB8	A	654	671	Right-handed alpha
Helix 18	AB9	A	689	702	Right-handed alpha
Helix 19	AC1	A	713	728	Right-handed alpha
Helix 20	AC2	A	743	756	Right-handed alpha
Helix 21	AC3	A	757	761	Right-handed 310
Helix 22	AC4	A	782	786	Right-handed 310
Helix 23	AC5	A	787	798	Right-handed alpha
Helix 24	AC6	A	800	812	Right-handed alpha
Helix 25	AC7	A	837	843	Right-handed alpha
Helix 26	AC8	A	844	846	Right-handed 310
Helix 27	AC9	A	847	855	Right-handed alpha
Helix 28	AD1	A	883	888	Right-handed alpha
Helix 29	AD2	A	889	891	Right-handed 310
Helix 30	AD3	A	896	906	Right-handed alpha
Helix 31	AD4	A	909	917	Right-handed alpha
Helix 32	AD5	A	928	932	Right-handed 310
Helix 33	AD6	A	934	968	Right-handed alpha
Helix 34	AD7	A	972	977	Right-handed alpha
Helix 35	AD8	A	996	1004	Right-handed alpha
Helix 36	AD9	A	1012	1016	Right-handed 310
Helix 37	AE1	A	1030	1040	Right-handed alpha
Helix 38	AE2	A	1045	1055	Right-handed alpha
Helix 39	AE3	A	1085	1096	Right-handed alpha
Helix 40	AE4	A	1105	1109	Right-handed 310
Helix 41	AE5	A	1113	1116	Right-handed 310
Helix 42	AE6	A	1135	1147	Right-handed alpha
Helix 43	AE7	A	1192	1196	Right-handed 310
Helix 44	AE8	A	1199	1206	Right-handed alpha
Helix 45	AE9	A	1207	1224	Right-handed alpha
Helix 46	AF1	A	1228	1235	Right-handed 310
Helix 47	AF2	A	1237	1239	Right-handed 310
Helix 48	AF3	A	1251	1260	Right-handed alpha
Helix 49	AF4	A	1261	1265	Right-handed 310
Helix 50	AF5	A	1271	1275	Right-handed 310
Helix 51	AF6	A	1279	1289	Right-handed alpha
Helix 52	AF7	A	1301	1303	Right-handed 310
Helix 53	AF8	A	1304	1319	Right-handed alpha
Helix 54	AF9	A	1334	1344	Right-handed alpha
Helix 55	AG1	A	1349	1356	Right-handed alpha
Helix 56	AG2	A	1359	1363	Right-handed 310
Helix 57	AG3	A	1387	1395	Right-handed alpha
Helix 58	AG4	A	1421	1427	Right-handed 310
Helix 59	AG5	A	1438	1441	Right-handed 310
Helix 60	AG6	A	1442	1476	Right-handed alpha
Helix 61	AG7	A	1486	1512	Right-handed alpha
Helix 62	AG8	A	1523	1531	Right-handed alpha
Helix 63	AG9	A	1535	1537	Right-handed 310
Helix 64	AH1	A	1549	1567	Right-handed alpha
Helix 65	AH2	A	1580	1585	Right-handed alpha
Helix 66	AH3	A	1590	1606	Right-handed alpha
Helix 67	AH4	A	1618	1624	Right-handed 310
Helix 68	AH5	A	1648	1652	Right-handed 310
Helix 69	AH6	A	1660	1666	Right-handed alpha
Helix 70	AH7	A	1669	1698	Right-handed alpha
Helix 71	AH8	A	1713	1720	Right-handed alpha
Helix 72	AH9	B	24	37	Right-handed alpha
Helix 73	AI1	B	54	69	Right-handed alpha
Helix 74	AI2	B	74	87	Right-handed alpha
Helix 75	AI3	B	93	102	Right-handed alpha
Helix 76	AI4	B	110	116	Right-handed alpha
Helix 77	AI5	B	118	126	Right-handed alpha
Helix 78	AI6	B	159	170	Right-handed alpha
Helix 79	AI7	B	170	189	Right-handed alpha
Helix 80	AI8	B	190	193	Right-handed 310
Helix 81	AI9	B	201	208	Right-handed alpha
Helix 82	AJ1	B	214	220	Right-handed alpha
Helix 83	AJ2	B	220	242	Right-handed alpha
Helix 84	AJ3	B	246	254	Right-handed alpha
Helix 85	AJ4	B	263	271	Right-handed alpha
Helix 86	AJ5	B	275	301	Right-handed alpha
Helix 87	AJ6	B	307	317	Right-handed alpha
Helix 88	AJ7	B	332	345	Right-handed alpha
Helix 89	AJ8	B	369	384	Right-handed alpha
Helix 90	AJ9	B	390	394	Right-handed 310
Helix 91	AK1	B	416	420	Right-handed 310
Helix 92	AK2	B	421	433	Right-handed alpha
Helix 93	AK3	B	460	470	Right-handed alpha
Helix 94	AK4	B	475	479	Right-handed alpha
Helix 95	AK5	B	492	495	Right-handed 310
Helix 96	AK6	B	496	505	Right-handed alpha
Helix 97	AK7	B	506	509	Right-handed 310
Helix 98	AK8	B	531	534	Right-handed 310
Helix 99	AK9	B	547	552	Right-handed alpha
Helix 100	AL1	B	570	575	Right-handed alpha
Helix 101	AL2	B	584	589	Right-handed alpha
Helix 102	AL3	B	590	599	Right-handed alpha
Helix 103	AL4	B	609	611	Right-handed 310
Helix 104	AL5	B	613	628	Right-handed alpha
Helix 105	AL6	B	644	660	Right-handed alpha
Helix 106	AL7	B	674	684	Right-handed alpha
Helix 107	AL8	B	696	708	Right-handed alpha
Helix 108	AL9	B	733	738	Right-handed alpha
Helix 109	AM1	B	740	746	Right-handed alpha
Helix 110	AM2	B	760	770	Right-handed alpha
Helix 111	AM3	B	771	777	Right-handed 310
Helix 112	AM4	B	789	793	Right-handed 310
Helix 113	AM5	B	801	811	Right-handed alpha
Helix 114	AM6	B	815	824	Right-handed 310
Helix 115	AM7	B	846	859	Right-handed alpha
Helix 116	AM8	B	866	874	Right-handed alpha
Helix 117	AM9	B	874	885	Right-handed alpha
Helix 118	AN1	B	900	904	Right-handed 310
Helix 119	AN2	B	905	917	Right-handed alpha
Helix 120	AN3	B	927	946	Right-handed alpha
Helix 121	AN4	B	957	962	Right-handed 310
Helix 122	AN5	B	963	972	Right-handed alpha
Helix 123	AN6	B	976	980	Right-handed 310
Helix 124	AN7	B	985	996	Right-handed alpha
Helix 125	AN8	B	1012	1018	Right-handed alpha
Helix 126	AN9	B	1022	1026	Right-handed 310
Helix 127	AO1	B	1027	1031	Right-handed 310
Helix 128	AO2	B	1035	1039	Right-handed 310
Helix 129	AO3	B	1045	1050	Right-handed 310
Helix 130	AO4	B	1057	1078	Right-handed alpha
Helix 131	AO5	B	1122	1132	Right-handed alpha
Helix 132	AO6	B	1136	1144	Right-handed alpha
Helix 133	AO7	B	1157	1162	Right-handed alpha
Helix 134	AO8	B	1241	1256	Right-handed alpha
Helix 135	AO9	B	1279	1291	Right-handed alpha
Helix 136	AP1	B	1310	1321	Right-handed alpha
Helix 137	AP2	B	1322	1324	Right-handed 310
Helix 138	AP3	B	1423	1433	Right-handed alpha
Helix 139	AP4	B	1497	1507	Right-handed alpha
Helix 140	AP5	B	1536	1544	Right-handed alpha
Helix 141	AP6	B	1552	1559	Right-handed alpha
Helix 142	AP7	B	1567	1583	Right-handed alpha
Helix 143	AP8	B	1587	1589	Right-handed 310
Helix 144	AP9	B	1664	1671	Right-handed alpha
Helix 145	AQ1	B	1671	1686	Right-handed alpha
Helix 146	AQ2	B	1692	1699	Right-handed alpha
Helix 147	AQ3	B	1710	1723	Right-handed alpha
Helix 148	AQ4	B	1757	1760	Right-handed 310
Helix 149	AQ5	B	1761	1783	Right-handed alpha
Helix 150	AQ6	B	1799	1804	Right-handed alpha
Helix 151	AQ7	B	1811	1829	Right-handed alpha
Helix 152	AQ8	B	1846	1851	Right-handed alpha
Helix 153	AQ9	B	1855	1870	Right-handed alpha
Helix 154	AR1	B	1892	1909	Right-handed alpha
Helix 155	AR2	B	1920	1928	Right-handed alpha
Helix 156	AR3	B	1928	1942	Right-handed alpha
Helix 157	AR4	B	1966	1971	Right-handed 310
Helix 158	AR5	B	1972	1984	Right-handed alpha
Helix 159	AR6	B	1985	1989	Right-handed 310
Helix 160	AR7	B	1990	1994	Right-handed 310
Helix 161	AR8	B	2010	2022	Right-handed alpha
Helix 162	AR9	B	2024	2032	Right-handed alpha

There are 28 sheets in PDB entry 6U5W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	43	47	parallel
Strand 3	B	1649	1653	parallel
Strand 4	B	1791	1794	parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	400	first strand
Strand 2	A	733	736	anti-parallel
Strand 3	A	703	706	parallel
Strand 4	A	678	683	parallel
Strand 5	A	769	772	parallel
Strand 6	A	819	825	parallel
Strand 7	A	861	867	parallel
Strand 8	A	921	924	parallel
Strand 9	A	642	647	anti-parallel
Strand 10	A	650	653	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	495	501	first strand
Strand 2	A	507	513	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1022	1025	first strand
Strand 2	A	1379	1386	anti-parallel
Strand 3	A	1324	1331	anti-parallel
Strand 4	A	1241	1243	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1058	1065	first strand
Strand 2	A	1068	1075	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1102	1103	first strand
Strand 2	A	1183	1184	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1124	first strand
Strand 2	A	1170	1177	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1132	1133	first strand
Strand 2	A	1161	1165	anti-parallel
Strand 3	A	1150	1154	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1376	1377	first strand
Strand 2	A	1586	1587	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1401	1408	first strand
Strand 2	A	1653	1659	anti-parallel
Strand 3	A	1641	1646	anti-parallel
Strand 4	A	1539	1543	parallel
Strand 5	A	1575	1578	parallel
Strand 6	A	1627	1628	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1726	1728	first strand
Strand 2	A	1731	1733	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	259	first strand
Strand 2	B	146	150	parallel
Strand 3	B	485	488	parallel
Strand 4	B	511	514	parallel
Strand 5	B	528	529	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	407	first strand
Strand 2	B	325	329	anti-parallel
Strand 3	B	363	367	anti-parallel
Strand 4	B	354	358	anti-parallel
Strand 5	B	473	474	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	558	first strand
Strand 2	B	564	567	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	579	581	first strand
Strand 2	B	786	788	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	607	first strand
Strand 2	B	634	639	parallel
Strand 3	B	663	669	parallel
Strand 4	B	689	692	parallel
Strand 5	B	715	719	parallel
Strand 6	B	750	754	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	727	first strand
Strand 2	B	841	844	anti-parallel
Strand 3	B	830	831	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	893	894	first strand
Strand 2	B	897	898	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	918	919	first strand
Strand 2	B	924	925	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1112	1115	first strand
Strand 2	B	1169	1173	anti-parallel
Strand 3	B	1178	1185	anti-parallel
Strand 4	B	1188	1198	anti-parallel
Strand 5	B	1202	1209	anti-parallel
Strand 6	B	1218	1226	anti-parallel
Strand 7	B	1235	1237	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1146	1148	first strand
Strand 2	B	1153	1155	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1271	1272	first strand
Strand 2	B	1357	1370	anti-parallel
Strand 3	B	1276	1277	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1387	1399	first strand
Strand 2	B	1373	1384	anti-parallel
Strand 3	B	1357	1370	anti-parallel
Strand 4	B	1409	1413	anti-parallel
Strand 5	B	1446	1457	anti-parallel
Strand 6	B	1417	1420	anti-parallel
Strand 7	B	1508	1509	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1446	1457	first strand
Strand 2	B	1463	1475	anti-parallel
Strand 3	B	1481	1491	anti-parallel
Strand 4	B	1436	1438	anti-parallel

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There are 9 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1387	1399	first strand
Strand 2	B	1336	1345	anti-parallel
Strand 3	B	1591	1598	anti-parallel
Strand 4	B	1636	1644	anti-parallel
Strand 5	B	1621	1630	anti-parallel
Strand 6	B	1607	1618	anti-parallel
Strand 7	B	1529	1531	anti-parallel
Strand 8	B	1607	1618	anti-parallel
Strand 9	B	1514	1521	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1703	1707	first strand
Strand 2	B	1749	1753	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1724	1725	first strand
Strand 2	B	1737	1738	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1874	1881	first strand
Strand 2	B	1885	1891	anti-parallel
Strand 3	B	1840	1845	anti-parallel
Strand 4	B	1954	1956	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U5W

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5W