Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U5Z entry

There are 6 chains in PDB entry 6U5Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 247	PRO 775
B	ALA 247	PRO 775
C	ALA 247	PRO 775
D	ALA 247	PRO 775
E	ALA 247	PRO 775
F	ALA 247	PRO 775

There are138 helices in PDB entry 6U5Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	248	260	Right-handed alpha
Helix 2	AA2	A	264	278	Right-handed alpha
Helix 3	AA3	A	287	301	Right-handed alpha
Helix 4	AA4	A	313	321	Right-handed alpha
Helix 5	AA5	A	329	341	Right-handed alpha
Helix 6	AA6	A	361	374	Right-handed alpha
Helix 7	AA7	A	387	392	Right-handed alpha
Helix 8	AA8	A	404	413	Right-handed alpha
Helix 9	AA9	A	436	445	Right-handed alpha
Helix 10	AB1	A	448	452	Right-handed 310
Helix 11	AB2	A	478	483	Right-handed alpha
Helix 12	AB3	A	494	505	Right-handed alpha
Helix 13	AB4	A	505	514	Right-handed alpha
Helix 14	AB5	A	524	535	Right-handed alpha
Helix 15	AB6	A	541	561	Right-handed alpha
Helix 16	AB7	A	575	580	Right-handed alpha
Helix 17	AB8	A	631	653	Right-handed alpha
Helix 18	AB9	A	657	661	Right-handed alpha
Helix 19	AC1	A	680	694	Right-handed alpha
Helix 20	AC2	A	718	729	Right-handed alpha
Helix 21	AC3	A	739	747	Right-handed 310
Helix 22	AC4	A	748	753	Right-handed alpha
Helix 23	AC5	A	762	771	Right-handed alpha
Helix 24	AC6	B	248	260	Right-handed alpha
Helix 25	AC7	B	264	278	Right-handed alpha
Helix 26	AC8	B	287	301	Right-handed alpha
Helix 27	AC9	B	313	321	Right-handed alpha
Helix 28	AD1	B	329	341	Right-handed alpha
Helix 29	AD2	B	361	374	Right-handed alpha
Helix 30	AD3	B	387	392	Right-handed alpha
Helix 31	AD4	B	404	413	Right-handed alpha
Helix 32	AD5	B	436	445	Right-handed alpha
Helix 33	AD6	B	448	452	Right-handed 310
Helix 34	AD7	B	478	483	Right-handed alpha
Helix 35	AD8	B	494	505	Right-handed alpha
Helix 36	AD9	B	505	514	Right-handed alpha
Helix 37	AE1	B	524	535	Right-handed alpha
Helix 38	AE2	B	541	561	Right-handed alpha
Helix 39	AE3	B	575	580	Right-handed alpha
Helix 40	AE4	B	631	653	Right-handed alpha
Helix 41	AE5	B	657	661	Right-handed alpha
Helix 42	AE6	B	680	694	Right-handed alpha
Helix 43	AE7	B	718	729	Right-handed alpha
Helix 44	AE8	B	739	747	Right-handed 310
Helix 45	AE9	B	748	753	Right-handed alpha
Helix 46	AF1	B	762	771	Right-handed alpha
Helix 47	AF2	C	248	260	Right-handed alpha
Helix 48	AF3	C	264	278	Right-handed alpha
Helix 49	AF4	C	287	301	Right-handed alpha
Helix 50	AF5	C	313	321	Right-handed alpha
Helix 51	AF6	C	329	341	Right-handed alpha
Helix 52	AF7	C	361	374	Right-handed alpha
Helix 53	AF8	C	387	392	Right-handed alpha
Helix 54	AF9	C	404	413	Right-handed alpha
Helix 55	AG1	C	436	445	Right-handed alpha
Helix 56	AG2	C	448	452	Right-handed 310
Helix 57	AG3	C	478	483	Right-handed alpha
Helix 58	AG4	C	494	505	Right-handed alpha
Helix 59	AG5	C	505	514	Right-handed alpha
Helix 60	AG6	C	524	535	Right-handed alpha
Helix 61	AG7	C	541	561	Right-handed alpha
Helix 62	AG8	C	575	580	Right-handed alpha
Helix 63	AG9	C	631	653	Right-handed alpha
Helix 64	AH1	C	657	661	Right-handed alpha
Helix 65	AH2	C	680	694	Right-handed alpha
Helix 66	AH3	C	718	729	Right-handed alpha
Helix 67	AH4	C	739	747	Right-handed 310
Helix 68	AH5	C	748	753	Right-handed alpha
Helix 69	AH6	C	762	771	Right-handed alpha
Helix 70	AH7	D	248	260	Right-handed alpha
Helix 71	AH8	D	264	278	Right-handed alpha
Helix 72	AH9	D	287	301	Right-handed alpha
Helix 73	AI1	D	313	321	Right-handed alpha
Helix 74	AI2	D	329	341	Right-handed alpha
Helix 75	AI3	D	361	374	Right-handed alpha
Helix 76	AI4	D	387	392	Right-handed alpha
Helix 77	AI5	D	404	413	Right-handed alpha
Helix 78	AI6	D	436	445	Right-handed alpha
Helix 79	AI7	D	448	452	Right-handed 310
Helix 80	AI8	D	478	483	Right-handed alpha
Helix 81	AI9	D	494	505	Right-handed alpha
Helix 82	AJ1	D	505	514	Right-handed alpha
Helix 83	AJ2	D	524	535	Right-handed alpha
Helix 84	AJ3	D	541	561	Right-handed alpha
Helix 85	AJ4	D	575	580	Right-handed alpha
Helix 86	AJ5	D	631	653	Right-handed alpha
Helix 87	AJ6	D	657	661	Right-handed alpha
Helix 88	AJ7	D	680	694	Right-handed alpha
Helix 89	AJ8	D	718	729	Right-handed alpha
Helix 90	AJ9	D	739	747	Right-handed 310
Helix 91	AK1	D	748	753	Right-handed alpha
Helix 92	AK2	D	762	771	Right-handed alpha
Helix 93	AK3	E	248	260	Right-handed alpha
Helix 94	AK4	E	264	278	Right-handed alpha
Helix 95	AK5	E	287	301	Right-handed alpha
Helix 96	AK6	E	313	321	Right-handed alpha
Helix 97	AK7	E	329	341	Right-handed alpha
Helix 98	AK8	E	361	374	Right-handed alpha
Helix 99	AK9	E	387	392	Right-handed alpha
Helix 100	AL1	E	404	413	Right-handed alpha
Helix 101	AL2	E	436	445	Right-handed alpha
Helix 102	AL3	E	448	452	Right-handed 310
Helix 103	AL4	E	478	483	Right-handed alpha
Helix 104	AL5	E	494	505	Right-handed alpha
Helix 105	AL6	E	505	514	Right-handed alpha
Helix 106	AL7	E	524	535	Right-handed alpha
Helix 107	AL8	E	541	561	Right-handed alpha
Helix 108	AL9	E	575	580	Right-handed alpha
Helix 109	AM1	E	631	653	Right-handed alpha
Helix 110	AM2	E	657	661	Right-handed alpha
Helix 111	AM3	E	680	694	Right-handed alpha
Helix 112	AM4	E	718	729	Right-handed alpha
Helix 113	AM5	E	739	747	Right-handed 310
Helix 114	AM6	E	748	753	Right-handed alpha
Helix 115	AM7	E	762	771	Right-handed alpha
Helix 116	AM8	F	248	260	Right-handed alpha
Helix 117	AM9	F	264	278	Right-handed alpha
Helix 118	AN1	F	287	301	Right-handed alpha
Helix 119	AN2	F	313	321	Right-handed alpha
Helix 120	AN3	F	329	341	Right-handed alpha
Helix 121	AN4	F	361	374	Right-handed alpha
Helix 122	AN5	F	387	392	Right-handed alpha
Helix 123	AN6	F	404	413	Right-handed alpha
Helix 124	AN7	F	436	445	Right-handed alpha
Helix 125	AN8	F	448	452	Right-handed 310
Helix 126	AN9	F	478	483	Right-handed alpha
Helix 127	AO1	F	494	505	Right-handed alpha
Helix 128	AO2	F	505	514	Right-handed alpha
Helix 129	AO3	F	524	535	Right-handed alpha
Helix 130	AO4	F	541	561	Right-handed alpha
Helix 131	AO5	F	575	580	Right-handed alpha
Helix 132	AO6	F	631	653	Right-handed alpha
Helix 133	AO7	F	657	661	Right-handed alpha
Helix 134	AO8	F	680	694	Right-handed alpha
Helix 135	AO9	F	718	729	Right-handed alpha
Helix 136	AP1	F	739	747	Right-handed 310
Helix 137	AP2	F	748	753	Right-handed alpha
Helix 138	AP3	F	762	771	Right-handed alpha

There are 30 sheets in PDB entry 6U5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	381	first strand
Strand 2	A	419	423	parallel
Strand 3	A	467	472	parallel
Strand 4	A	353	355	parallel
Strand 5	A	487	489	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	568	570	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	597	602	first strand
Strand 2	A	609	619	anti-parallel
Strand 3	A	662	667	anti-parallel
Strand 4	A	624	627	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	703	first strand
Strand 2	A	733	737	parallel
Strand 3	A	756	760	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	707	first strand
Strand 2	A	713	714	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	381	first strand
Strand 2	B	419	423	parallel
Strand 3	B	467	472	parallel
Strand 4	B	353	355	parallel
Strand 5	B	487	489	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	521	523	first strand
Strand 2	B	568	570	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	597	602	first strand
Strand 2	B	609	619	anti-parallel
Strand 3	B	662	667	anti-parallel
Strand 4	B	624	627	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	703	first strand
Strand 2	B	733	737	parallel
Strand 3	B	756	760	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	706	707	first strand
Strand 2	B	713	714	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	381	first strand
Strand 2	C	419	423	parallel
Strand 3	C	467	472	parallel
Strand 4	C	353	355	parallel
Strand 5	C	487	489	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	521	523	first strand
Strand 2	C	568	570	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	597	602	first strand
Strand 2	C	609	619	anti-parallel
Strand 3	C	662	667	anti-parallel
Strand 4	C	624	627	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	703	first strand
Strand 2	C	733	737	parallel
Strand 3	C	756	760	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	706	707	first strand
Strand 2	C	713	714	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	381	first strand
Strand 2	D	419	423	parallel
Strand 3	D	467	472	parallel
Strand 4	D	353	355	parallel
Strand 5	D	487	489	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	523	first strand
Strand 2	D	568	570	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	597	602	first strand
Strand 2	D	609	619	anti-parallel
Strand 3	D	662	667	anti-parallel
Strand 4	D	624	627	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	701	703	first strand
Strand 2	D	733	737	parallel
Strand 3	D	756	760	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	713	714	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	377	381	first strand
Strand 2	E	419	423	parallel
Strand 3	E	467	472	parallel
Strand 4	E	353	355	parallel
Strand 5	E	487	489	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	521	523	first strand
Strand 2	E	568	570	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	597	602	first strand
Strand 2	E	609	619	anti-parallel
Strand 3	E	662	667	anti-parallel
Strand 4	E	624	627	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	701	703	first strand
Strand 2	E	733	737	parallel
Strand 3	E	756	760	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	706	707	first strand
Strand 2	E	713	714	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	377	381	first strand
Strand 2	F	419	423	parallel
Strand 3	F	467	472	parallel
Strand 4	F	353	355	parallel
Strand 5	F	487	489	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	521	523	first strand
Strand 2	F	568	570	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	597	602	first strand
Strand 2	F	609	619	anti-parallel
Strand 3	F	662	667	anti-parallel
Strand 4	F	624	627	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	701	703	first strand
Strand 2	F	733	737	parallel
Strand 3	F	756	760	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	706	707	first strand
Strand 2	F	713	714	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U5Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U5Z