Analysis of interatomic Contacts of Structural Units in PDB entry:
6U6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U6T entry

There are 2 chains in PDB entry 6U6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 46ASN 313
B
 ALA 43ASN 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6U6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
109 113Right-handed 310
Helix 2
AA2
A
194 198Right-handed 310
Helix 3
AA3
A
288 292Right-handed 310
Helix 4
AA4
B
109 113Right-handed 310
Helix 5
AA5
B
194 198Right-handed 310
Helix 6
AA6
B
288 292Right-handed 310
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There are 13 sheets in PDB entry 6U6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
131 134parallel
Strand 3
A
114 120anti-parallel
Strand 4
A
69 73anti-parallel
Strand 5
A
76 80anti-parallel
Strand 6
A
83 84anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
131 134parallel
Strand 3
A
114 120anti-parallel
Strand 4
A
127 128anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
102 105anti-parallel
Strand 3
A
91 94anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 144first strand
Strand 2
A
156 165anti-parallel
Strand 3
A
187 190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
213 232parallel
Strand 3
A
199 206anti-parallel
Strand 4
A
169 175anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
213 232parallel
Strand 3
A
241 250anti-parallel
Strand 4
A
279 284anti-parallel
Strand 5
A
271 275anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
254 259anti-parallel
Strand 3
A
293 300anti-parallel
Strand 4
A
305 312anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 51first strand
Strand 2
B
127 144parallel
Strand 3
B
114 120anti-parallel
Strand 4
B
69 73anti-parallel
Strand 5
B
76 80anti-parallel
Strand 6
B
83 84anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 51first strand
Strand 2
B
127 144parallel
Strand 3
B
156 165anti-parallel
Strand 4
B
187 190anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
102 105anti-parallel
Strand 3
B
91 94anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
213 232parallel
Strand 3
B
199 206anti-parallel
Strand 4
B
169 174anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
213 232parallel
Strand 3
B
241 250anti-parallel
Strand 4
B
279 284anti-parallel
Strand 5
B
271 275anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
254 259anti-parallel
Strand 3
B
294 300anti-parallel
Strand 4
B
307 311anti-parallel
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