Analysis of interatomic Contacts of Structural Units in PDB entry:
6U75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U75 entry

There are 2 chains in PDB entry 6U75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 153ILE 420
B
 LEU 153ILE 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6U75. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
188 198Right-handed alpha
Helix 2
AA2
A
258 261Right-handed 310
Helix 3
AA3
A
292 302Right-handed alpha
Helix 4
AA4
A
307 320Right-handed alpha
Helix 5
AA5
A
362 370Right-handed alpha
Helix 6
AA6
A
385 389Right-handed 310
Helix 7
AA7
A
392 401Right-handed alpha
Helix 8
AA8
B
188 197Right-handed alpha
Helix 9
AA9
B
258 261Right-handed 310
Helix 10
AB1
B
292 303Right-handed alpha
Helix 11
AB2
B
307 321Right-handed alpha
Helix 12
AB3
B
362 372Right-handed alpha
Helix 13
AB4
B
385 389Right-handed 310
Helix 14
AB5
B
392 400Right-handed alpha
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There are 10 sheets in PDB entry 6U75. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 164first strand
Strand 2
A
281 290anti-parallel
Strand 3
A
170 172anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 164first strand
Strand 2
A
281 290anti-parallel
Strand 3
A
201 209anti-parallel
Strand 4
A
255 256anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 185first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
230 233anti-parallel
Strand 4
A
236 237anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 335first strand
Strand 2
A
408 411anti-parallel
Strand 3
A
417 419anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 361first strand
Strand 2
A
348 350anti-parallel
Strand 3
A
390 391anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 164first strand
Strand 2
B
281 290anti-parallel
Strand 3
B
170 172anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 164first strand
Strand 2
B
281 290anti-parallel
Strand 3
B
201 209anti-parallel
Strand 4
B
255 256anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 185first strand
Strand 2
B
268 274anti-parallel
Strand 3
B
230 233anti-parallel
Strand 4
B
236 237anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 335first strand
Strand 2
B
408 412anti-parallel
Strand 3
B
417 419anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 361first strand
Strand 2
B
348 350anti-parallel
Strand 3
B
390 391anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il