Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U7A entry

There are 8 chains in PDB entry 6U7A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ASN 424
B	SER 2	ASN 424
C	SER 2	ASN 424
D	SER 2	SER 430
E	SER 2	ASN 424
F	PHE 3	ASN 424
G	SER 2	ASN 424
H	PRO 8	LEU 423

There are136 helices in PDB entry 6U7A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	28	Right-handed alpha
Helix 2	AA2	A	40	46	Right-handed alpha
Helix 3	AA3	A	47	53	Right-handed 310
Helix 4	AA4	A	75	87	Right-handed alpha
Helix 5	AA5	A	89	91	Right-handed 310
Helix 6	AA6	A	99	115	Right-handed alpha
Helix 7	AA7	A	122	126	Right-handed 310
Helix 8	AA8	A	139	149	Right-handed alpha
Helix 9	AA9	A	164	175	Right-handed alpha
Helix 10	AB1	A	196	206	Right-handed alpha
Helix 11	AB2	A	235	243	Right-handed alpha
Helix 12	AB3	A	271	283	Right-handed alpha
Helix 13	AB4	A	290	302	Right-handed alpha
Helix 14	AB5	A	303	334	Right-handed alpha
Helix 15	AB6	A	358	368	Right-handed alpha
Helix 16	AB7	A	380	384	Right-handed 310
Helix 17	AB8	A	399	424	Right-handed alpha
Helix 18	AB9	B	7	28	Right-handed alpha
Helix 19	AC1	B	40	46	Right-handed alpha
Helix 20	AC2	B	47	53	Right-handed 310
Helix 21	AC3	B	75	87	Right-handed alpha
Helix 22	AC4	B	89	91	Right-handed 310
Helix 23	AC5	B	99	115	Right-handed alpha
Helix 24	AC6	B	122	126	Right-handed 310
Helix 25	AC7	B	139	150	Right-handed alpha
Helix 26	AC8	B	164	175	Right-handed alpha
Helix 27	AC9	B	196	206	Right-handed alpha
Helix 28	AD1	B	235	243	Right-handed alpha
Helix 29	AD2	B	271	283	Right-handed alpha
Helix 30	AD3	B	290	302	Right-handed alpha
Helix 31	AD4	B	303	334	Right-handed alpha
Helix 32	AD5	B	358	369	Right-handed alpha
Helix 33	AD6	B	380	384	Right-handed 310
Helix 34	AD7	B	399	424	Right-handed alpha
Helix 35	AD8	C	7	28	Right-handed alpha
Helix 36	AD9	C	40	46	Right-handed alpha
Helix 37	AE1	C	47	53	Right-handed 310
Helix 38	AE2	C	75	87	Right-handed alpha
Helix 39	AE3	C	89	91	Right-handed 310
Helix 40	AE4	C	99	115	Right-handed alpha
Helix 41	AE5	C	122	126	Right-handed 310
Helix 42	AE6	C	139	149	Right-handed alpha
Helix 43	AE7	C	164	175	Right-handed alpha
Helix 44	AE8	C	196	206	Right-handed alpha
Helix 45	AE9	C	235	243	Right-handed alpha
Helix 46	AF1	C	271	286	Right-handed alpha
Helix 47	AF2	C	290	302	Right-handed alpha
Helix 48	AF3	C	303	334	Right-handed alpha
Helix 49	AF4	C	358	369	Right-handed alpha
Helix 50	AF5	C	380	384	Right-handed 310
Helix 51	AF6	C	399	424	Right-handed alpha
Helix 52	AF7	D	7	28	Right-handed alpha
Helix 53	AF8	D	40	46	Right-handed alpha
Helix 54	AF9	D	47	53	Right-handed 310
Helix 55	AG1	D	75	87	Right-handed alpha
Helix 56	AG2	D	89	91	Right-handed 310
Helix 57	AG3	D	99	114	Right-handed alpha
Helix 58	AG4	D	122	126	Right-handed 310
Helix 59	AG5	D	139	149	Right-handed alpha
Helix 60	AG6	D	164	175	Right-handed alpha
Helix 61	AG7	D	196	206	Right-handed alpha
Helix 62	AG8	D	235	243	Right-handed alpha
Helix 63	AG9	D	271	286	Right-handed alpha
Helix 64	AH1	D	290	302	Right-handed alpha
Helix 65	AH2	D	303	334	Right-handed alpha
Helix 66	AH3	D	358	368	Right-handed alpha
Helix 67	AH4	D	380	384	Right-handed 310
Helix 68	AH5	D	399	429	Right-handed alpha
Helix 69	AH6	E	7	28	Right-handed alpha
Helix 70	AH7	E	40	46	Right-handed alpha
Helix 71	AH8	E	47	53	Right-handed 310
Helix 72	AH9	E	75	87	Right-handed alpha
Helix 73	AI1	E	89	91	Right-handed 310
Helix 74	AI2	E	99	115	Right-handed alpha
Helix 75	AI3	E	122	126	Right-handed 310
Helix 76	AI4	E	139	150	Right-handed alpha
Helix 77	AI5	E	164	175	Right-handed alpha
Helix 78	AI6	E	196	206	Right-handed alpha
Helix 79	AI7	E	235	243	Right-handed alpha
Helix 80	AI8	E	271	286	Right-handed alpha
Helix 81	AI9	E	290	302	Right-handed alpha
Helix 82	AJ1	E	303	334	Right-handed alpha
Helix 83	AJ2	E	358	369	Right-handed alpha
Helix 84	AJ3	E	380	384	Right-handed 310
Helix 85	AJ4	E	399	424	Right-handed alpha
Helix 86	AJ5	F	7	27	Right-handed alpha
Helix 87	AJ6	F	40	46	Right-handed alpha
Helix 88	AJ7	F	47	53	Right-handed 310
Helix 89	AJ8	F	75	87	Right-handed alpha
Helix 90	AJ9	F	89	91	Right-handed 310
Helix 91	AK1	F	99	115	Right-handed alpha
Helix 92	AK2	F	122	126	Right-handed 310
Helix 93	AK3	F	139	150	Right-handed alpha
Helix 94	AK4	F	164	175	Right-handed alpha
Helix 95	AK5	F	196	206	Right-handed alpha
Helix 96	AK6	F	235	243	Right-handed alpha
Helix 97	AK7	F	271	286	Right-handed alpha
Helix 98	AK8	F	290	302	Right-handed alpha
Helix 99	AK9	F	303	334	Right-handed alpha
Helix 100	AL1	F	358	368	Right-handed alpha
Helix 101	AL2	F	380	384	Right-handed 310
Helix 102	AL3	F	399	424	Right-handed alpha
Helix 103	AL4	G	7	29	Right-handed alpha
Helix 104	AL5	G	40	46	Right-handed alpha
Helix 105	AL6	G	47	53	Right-handed 310
Helix 106	AL7	G	75	87	Right-handed alpha
Helix 107	AL8	G	89	91	Right-handed 310
Helix 108	AL9	G	99	115	Right-handed alpha
Helix 109	AM1	G	122	126	Right-handed 310
Helix 110	AM2	G	139	149	Right-handed alpha
Helix 111	AM3	G	164	175	Right-handed alpha
Helix 112	AM4	G	196	206	Right-handed alpha
Helix 113	AM5	G	235	243	Right-handed alpha
Helix 114	AM6	G	271	286	Right-handed alpha
Helix 115	AM7	G	290	302	Right-handed alpha
Helix 116	AM8	G	303	334	Right-handed alpha
Helix 117	AM9	G	358	368	Right-handed alpha
Helix 118	AN1	G	380	384	Right-handed 310
Helix 119	AN2	G	399	424	Right-handed alpha
Helix 120	AN3	H	9	28	Right-handed alpha
Helix 121	AN4	H	40	46	Right-handed alpha
Helix 122	AN5	H	47	53	Right-handed 310
Helix 123	AN6	H	75	87	Right-handed alpha
Helix 124	AN7	H	89	91	Right-handed 310
Helix 125	AN8	H	99	115	Right-handed alpha
Helix 126	AN9	H	122	126	Right-handed 310
Helix 127	AO1	H	139	150	Right-handed alpha
Helix 128	AO2	H	164	175	Right-handed alpha
Helix 129	AO3	H	196	206	Right-handed alpha
Helix 130	AO4	H	235	243	Right-handed alpha
Helix 131	AO5	H	271	283	Right-handed alpha
Helix 132	AO6	H	290	302	Right-handed alpha
Helix 133	AO7	H	303	334	Right-handed alpha
Helix 134	AO8	H	358	368	Right-handed alpha
Helix 135	AO9	H	380	384	Right-handed 310
Helix 136	AP1	H	399	422	Right-handed alpha

There are 24 sheets in PDB entry 6U7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	371	372	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	95	first strand
Strand 2	A	266	269	anti-parallel
Strand 3	A	249	254	anti-parallel
Strand 4	A	214	218	parallel
Strand 5	A	178	183	parallel
Strand 6	A	131	136	parallel
Strand 7	A	152	159	parallel
Strand 8	A	162	163	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	350	353	anti-parallel
Strand 3	A	390	393	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	371	372	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	95	first strand
Strand 2	B	266	269	anti-parallel
Strand 3	B	249	254	anti-parallel
Strand 4	B	214	218	parallel
Strand 5	B	178	183	parallel
Strand 6	B	131	136	parallel
Strand 7	B	152	159	parallel
Strand 8	B	162	163	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	350	353	anti-parallel
Strand 3	B	390	393	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	371	372	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	95	first strand
Strand 2	C	266	269	anti-parallel
Strand 3	C	249	254	anti-parallel
Strand 4	C	214	218	parallel
Strand 5	C	178	183	parallel
Strand 6	C	131	136	parallel
Strand 7	C	152	159	parallel
Strand 8	C	162	163	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	350	353	anti-parallel
Strand 3	C	390	393	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	371	372	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	95	first strand
Strand 2	D	266	269	anti-parallel
Strand 3	D	249	254	anti-parallel
Strand 4	D	214	218	parallel
Strand 5	D	178	183	parallel
Strand 6	D	131	136	parallel
Strand 7	D	152	159	parallel
Strand 8	D	162	163	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	341	first strand
Strand 2	D	350	353	anti-parallel
Strand 3	D	390	393	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	33	first strand
Strand 2	E	371	372	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	93	95	first strand
Strand 2	E	266	269	anti-parallel
Strand 3	E	249	254	anti-parallel
Strand 4	E	214	218	parallel
Strand 5	E	178	183	parallel
Strand 6	E	131	136	parallel
Strand 7	E	152	159	parallel
Strand 8	E	162	163	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	341	first strand
Strand 2	E	350	353	anti-parallel
Strand 3	E	390	393	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	33	first strand
Strand 2	F	371	372	parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	95	first strand
Strand 2	F	266	269	anti-parallel
Strand 3	F	249	254	anti-parallel
Strand 4	F	214	218	parallel
Strand 5	F	178	183	parallel
Strand 6	F	131	136	parallel
Strand 7	F	152	159	parallel
Strand 8	F	162	163	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	340	341	first strand
Strand 2	F	350	353	anti-parallel
Strand 3	F	390	393	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	32	33	first strand
Strand 2	G	371	372	parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	95	first strand
Strand 2	G	266	269	anti-parallel
Strand 3	G	249	254	anti-parallel
Strand 4	G	214	218	parallel
Strand 5	G	178	183	parallel
Strand 6	G	131	136	parallel
Strand 7	G	152	159	parallel
Strand 8	G	162	163	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	340	341	first strand
Strand 2	G	350	353	anti-parallel
Strand 3	G	390	393	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	33	first strand
Strand 2	H	371	372	parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	93	95	first strand
Strand 2	H	266	269	anti-parallel
Strand 3	H	249	254	anti-parallel
Strand 4	H	214	218	parallel
Strand 5	H	178	183	parallel
Strand 6	H	131	136	parallel
Strand 7	H	152	159	parallel
Strand 8	H	162	163	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	340	341	first strand
Strand 2	H	350	353	anti-parallel
Strand 3	H	390	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U7A

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7A